RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
LINC01993-201ENST00000374945 SOX12O15370 315 aa16.3■□□□□ 0.2
LINC01993-201ENST00000374945 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
LINC01993-201ENST00000374945 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
LINC01993-201ENST00000374945 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
LINC01993-201ENST00000374945 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
LINC01993-201ENST00000374945 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
LINC01993-201ENST00000374945 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
LINC01993-201ENST00000374945 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
LINC01993-201ENST00000374945 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
LINC01993-201ENST00000374945 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
LINC01993-201ENST00000374945 C3P01024 1663 aa16.28■□□□□ 0.2
LINC01993-201ENST00000374945 RRS1Q15050 365 aaKnown RBP16.28■□□□□ 0.2
LINC01993-201ENST00000374945 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
LINC01993-201ENST00000374945 NSD2O96028 1365 aa16.27■□□□□ 0.19
LINC01993-201ENST00000374945 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.19
LINC01993-201ENST00000374945 DZIP1LQ8IYY4 767 aaKnown RBP16.27■□□□□ 0.19
LINC01993-201ENST00000374945 EID1Q9Y6B2 187 aa16.27■□□□□ 0.19
LINC01993-201ENST00000374945 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
LINC01993-201ENST00000374945 PDCL3Q9H2J4 239 aa16.26■□□□□ 0.19
LINC01993-201ENST00000374945 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
LINC01993-201ENST00000374945 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
LINC01993-201ENST00000374945 HMOX1P09601 288 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 SKOR2Q2VWA4 1001 aaPredicted RBP16.25■□□□□ 0.19
LINC01993-201ENST00000374945 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
LINC01993-201ENST00000374945 TSR2Q969E8 191 aaKnown RBP16.24■□□□□ 0.19
LINC01993-201ENST00000374945 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
LINC01993-201ENST00000374945 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
LINC01993-201ENST00000374945 KIF2CQ99661 725 aa16.23■□□□□ 0.19
LINC01993-201ENST00000374945 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
LINC01993-201ENST00000374945 TRIM27P14373 513 aa16.22■□□□□ 0.19
LINC01993-201ENST00000374945 CPS1P31327 1500 aa16.22■□□□□ 0.19
LINC01993-201ENST00000374945 OFD1O75665 1012 aa16.22■□□□□ 0.19
LINC01993-201ENST00000374945 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
LINC01993-201ENST00000374945 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
LINC01993-201ENST00000374945 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
LINC01993-201ENST00000374945 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
LINC01993-201ENST00000374945 PTMSP20962 102 aa16.21■□□□□ 0.19
LINC01993-201ENST00000374945 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
LINC01993-201ENST00000374945 IBTKQ9P2D0 1353 aaPredicted RBP16.2■□□□□ 0.18
LINC01993-201ENST00000374945 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.2■□□□□ 0.18
LINC01993-201ENST00000374945 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
LINC01993-201ENST00000374945 ACEP12821 1306 aa16.2■□□□□ 0.18
LINC01993-201ENST00000374945 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
LINC01993-201ENST00000374945 RIPK4P57078 832 aa16.2■□□□□ 0.18
LINC01993-201ENST00000374945 ATP7BP35670 1465 aa16.19■□□□□ 0.18
LINC01993-201ENST00000374945 NASPP49321 788 aaPredicted RBP16.19■□□□□ 0.18
LINC01993-201ENST00000374945 THEMISQ8N1K5 641 aaPredicted RBP16.19■□□□□ 0.18
LINC01993-201ENST00000374945 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
LINC01993-201ENST00000374945 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
LINC01993-201ENST00000374945 CT47B1P0C2W7 299 aaPredicted RBP16.19■□□□□ 0.18
LINC01993-201ENST00000374945 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
LINC01993-201ENST00000374945 TECPR2O15040 1411 aa16.19■□□□□ 0.18
LINC01993-201ENST00000374945 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
LINC01993-201ENST00000374945 KCNA6P17658 529 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
LINC01993-201ENST00000374945 NUCB1Q02818 461 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
LINC01993-201ENST00000374945 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
LINC01993-201ENST00000374945 COG3Q96JB2 828 aa16.18■□□□□ 0.18
LINC01993-201ENST00000374945 SSFA2P28290 1259 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 TERF1P54274 439 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
LINC01993-201ENST00000374945 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
LINC01993-201ENST00000374945 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
LINC01993-201ENST00000374945 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
LINC01993-201ENST00000374945 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
LINC01993-201ENST00000374945 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
LINC01993-201ENST00000374945 ANKRD26Q9UPS8 1709 aa16.16■□□□□ 0.18
LINC01993-201ENST00000374945 K7ELQ4 463 aaPredicted RBP16.15■□□□□ 0.18
LINC01993-201ENST00000374945 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
LINC01993-201ENST00000374945 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
LINC01993-201ENST00000374945 TMEM57Q8N5G2 664 aa16.15■□□□□ 0.18
LINC01993-201ENST00000374945 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
LINC01993-201ENST00000374945 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
LINC01993-201ENST00000374945 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
LINC01993-201ENST00000374945 BMP2KLQ5H9B9 411 aa16.14■□□□□ 0.17
LINC01993-201ENST00000374945 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
LINC01993-201ENST00000374945 MED14O60244 1454 aa16.13■□□□□ 0.17
LINC01993-201ENST00000374945 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
LINC01993-201ENST00000374945 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
LINC01993-201ENST00000374945 CDC42BPGQ6DT37 1551 aa16.13■□□□□ 0.17
LINC01993-201ENST00000374945 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
LINC01993-201ENST00000374945 CHD1LQ86WJ1 897 aa16.13■□□□□ 0.17
LINC01993-201ENST00000374945 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
LINC01993-201ENST00000374945 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
LINC01993-201ENST00000374945 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms