RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CRYBG1Q9Y4K1 1723 aa20.71■□□□□ 0.91
NIPAL3-204ENST00000374399 HMOX1P09601 288 aa20.71■□□□□ 0.91
NIPAL3-204ENST00000374399 HOXC9P31274 260 aa20.71■□□□□ 0.91
NIPAL3-204ENST00000374399 TRMT2AQ8IZ69 625 aaKnown RBP20.71■□□□□ 0.91
NIPAL3-204ENST00000374399 CCDC27Q2M243 656 aa20.7■□□□□ 0.9
NIPAL3-204ENST00000374399 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
NIPAL3-204ENST00000374399 GCP02774 474 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 AMPHP49418 695 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 GOLGA2Q08379 1002 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 SLFN5Q08AF3 891 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 NEUROD2Q15784 382 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 PHACTR3Q96KR7 559 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 TNS3Q68CZ2 1445 aa20.69■□□□□ 0.9
NIPAL3-204ENST00000374399 RTL1A6NKG5 1358 aa20.68■□□□□ 0.9
NIPAL3-204ENST00000374399 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
NIPAL3-204ENST00000374399 KCNH5Q8NCM2 988 aa20.68■□□□□ 0.9
NIPAL3-204ENST00000374399 NHSL1Q5SYE7 1610 aa20.68■□□□□ 0.9
NIPAL3-204ENST00000374399 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
NIPAL3-204ENST00000374399 SPATA31A3Q5VYP0 1347 aa20.67■□□□□ 0.9
NIPAL3-204ENST00000374399 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
NIPAL3-204ENST00000374399 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
NIPAL3-204ENST00000374399 ARHGEF25Q86VW2 580 aa20.66■□□□□ 0.9
NIPAL3-204ENST00000374399 IP6K1Q92551 441 aa20.66■□□□□ 0.9
NIPAL3-204ENST00000374399 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
NIPAL3-204ENST00000374399 RNF123Q5XPI4 1314 aa20.65■□□□□ 0.9
NIPAL3-204ENST00000374399 ARHGEF10O15013 1369 aa20.65■□□□□ 0.9
NIPAL3-204ENST00000374399 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
NIPAL3-204ENST00000374399 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.9
NIPAL3-204ENST00000374399 IGSF1Q8N6C5 1336 aa20.64■□□□□ 0.89
NIPAL3-204ENST00000374399 KDRP35968 1356 aa20.64■□□□□ 0.89
NIPAL3-204ENST00000374399 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
NIPAL3-204ENST00000374399 EYA1Q99502 592 aa20.64■□□□□ 0.89
NIPAL3-204ENST00000374399 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
NIPAL3-204ENST00000374399 RGPD2P0DJD1 1756 aa20.62■□□□□ 0.89
NIPAL3-204ENST00000374399 PLEKHG5O94827 1062 aa20.61■□□□□ 0.89
NIPAL3-204ENST00000374399 COL18A1P39060 1754 aa20.61■□□□□ 0.89
NIPAL3-204ENST00000374399 E9PSI1 815 aa20.61■□□□□ 0.89
NIPAL3-204ENST00000374399 RIPK4P57078 832 aa20.61■□□□□ 0.89
NIPAL3-204ENST00000374399 RGPD5Q99666 1765 aa20.61■□□□□ 0.89
NIPAL3-204ENST00000374399 NFE2L2Q16236 605 aa20.6■□□□□ 0.89
NIPAL3-204ENST00000374399 FKBP8Q14318 412 aa20.59■□□□□ 0.89
NIPAL3-204ENST00000374399 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
NIPAL3-204ENST00000374399 ROBO1Q9Y6N7 1651 aa20.59■□□□□ 0.89
NIPAL3-204ENST00000374399 RCAN3Q9UKA8 241 aa20.58■□□□□ 0.88
NIPAL3-204ENST00000374399 AXIN2Q9Y2T1 843 aa20.58■□□□□ 0.88
NIPAL3-204ENST00000374399 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
NIPAL3-204ENST00000374399 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
NIPAL3-204ENST00000374399 ZC3H6P61129 1189 aaKnown RBP20.56■□□□□ 0.88
NIPAL3-204ENST00000374399 CAMTA1Q9Y6Y1 1673 aa20.55■□□□□ 0.88
NIPAL3-204ENST00000374399 ZBTB7CA1YPR0 619 aa20.55■□□□□ 0.88
NIPAL3-204ENST00000374399 NCAPD2Q15021 1401 aa20.55■□□□□ 0.88
NIPAL3-204ENST00000374399 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
NIPAL3-204ENST00000374399 NBPF6Q5VWK0 638 aa20.54■□□□□ 0.88
NIPAL3-204ENST00000374399 NBPF4Q96M43 638 aa20.54■□□□□ 0.88
NIPAL3-204ENST00000374399 AHDC1Q5TGY3 1603 aaPredicted RBP20.54■□□□□ 0.88
NIPAL3-204ENST00000374399 NEFMP07197 916 aa20.53■□□□□ 0.88
NIPAL3-204ENST00000374399 CPDO75976 1380 aa20.53■□□□□ 0.88
NIPAL3-204ENST00000374399 IL16Q14005 1332 aa20.53■□□□□ 0.88
NIPAL3-204ENST00000374399 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
NIPAL3-204ENST00000374399 NEFLP07196 543 aa20.52■□□□□ 0.88
NIPAL3-204ENST00000374399 USHBP1Q8N6Y0 703 aa20.51■□□□□ 0.87
NIPAL3-204ENST00000374399 LRRC59Q96AG4 307 aaKnown RBP20.51■□□□□ 0.87
NIPAL3-204ENST00000374399 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
NIPAL3-204ENST00000374399 ABCC6O95255 1503 aa20.51■□□□□ 0.87
NIPAL3-204ENST00000374399 KIAA0232Q92628 1395 aa20.5■□□□□ 0.87
NIPAL3-204ENST00000374399 FAM83GA6ND36 823 aa20.5■□□□□ 0.87
NIPAL3-204ENST00000374399 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
NIPAL3-204ENST00000374399 ANKRD24Q8TF21 1146 aa20.5■□□□□ 0.87
NIPAL3-204ENST00000374399 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
NIPAL3-204ENST00000374399 ERBB3P21860 1342 aa20.48■□□□□ 0.87
NIPAL3-204ENST00000374399 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
NIPAL3-204ENST00000374399 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
NIPAL3-204ENST00000374399 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
NIPAL3-204ENST00000374399 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
NIPAL3-204ENST00000374399 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
NIPAL3-204ENST00000374399 ZNF853P0CG23 659 aa20.46■□□□□ 0.87
NIPAL3-204ENST00000374399 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
NIPAL3-204ENST00000374399 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
NIPAL3-204ENST00000374399 COL22A1Q8NFW1 1626 aaPredicted RBP20.44■□□□□ 0.86
NIPAL3-204ENST00000374399 COL16A1Q07092 1604 aaPredicted RBP20.44■□□□□ 0.86
NIPAL3-204ENST00000374399 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
NIPAL3-204ENST00000374399 LRRC37A3O60309 1634 aa20.42■□□□□ 0.86
NIPAL3-204ENST00000374399 CRB1P82279 1406 aa20.42■□□□□ 0.86
NIPAL3-204ENST00000374399 PLIN1O60240 522 aa20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 MCM10Q7L590 875 aa20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 BCAR3O75815 825 aa20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
NIPAL3-204ENST00000374399 ERICH6BQ5W0A0 696 aa20.4■□□□□ 0.86
NIPAL3-204ENST00000374399 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.86
NIPAL3-204ENST00000374399 CFAP44Q96MT7 982 aa20.39■□□□□ 0.86
NIPAL3-204ENST00000374399 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
NIPAL3-204ENST00000374399 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
NIPAL3-204ENST00000374399 GNAI1P63096 354 aa20.38■□□□□ 0.85
NIPAL3-204ENST00000374399 PRDM11Q9NQV5 511 aa20.38■□□□□ 0.85
NIPAL3-204ENST00000374399 TOM1O60784 492 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 1292.4 ms