RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 VAMP4O75379 141 aa25.24■■□□□ 1.63
SUSD1-204ENST00000374270 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
SUSD1-204ENST00000374270 NLRP1Q9C000 1473 aa25.24■■□□□ 1.63
SUSD1-204ENST00000374270 PPP6R1Q9UPN7 881 aa25.23■■□□□ 1.63
SUSD1-204ENST00000374270 USP19O94966 1318 aa25.23■■□□□ 1.63
SUSD1-204ENST00000374270 GNAI1P63096 354 aa25.22■■□□□ 1.63
SUSD1-204ENST00000374270 KIF16BQ96L93 1317 aa25.22■■□□□ 1.63
SUSD1-204ENST00000374270 AMPHP49418 695 aa25.21■■□□□ 1.63
SUSD1-204ENST00000374270 TTC21BQ7Z4L5 1316 aa25.21■■□□□ 1.63
SUSD1-204ENST00000374270 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.62
SUSD1-204ENST00000374270 SLC4A10Q6U841 1118 aa25.19■■□□□ 1.62
SUSD1-204ENST00000374270 ZBTB40Q9NUA8 1239 aa25.19■■□□□ 1.62
SUSD1-204ENST00000374270 PNPLA6Q8IY17 1366 aa25.17■■□□□ 1.62
SUSD1-204ENST00000374270 CPS1P31327 1500 aa25.17■■□□□ 1.62
SUSD1-204ENST00000374270 TMEM2Q9UHN6 1383 aa25.17■■□□□ 1.62
SUSD1-204ENST00000374270 NLRP6P59044 892 aa25.17■■□□□ 1.62
SUSD1-204ENST00000374270 LMOD2Q6P5Q4 547 aa25.17■■□□□ 1.62
SUSD1-204ENST00000374270 MRPL50Q8N5N7 158 aaKnown RBP25.17■■□□□ 1.62
SUSD1-204ENST00000374270 CT47B1P0C2W7 299 aaPredicted RBP25.16■■□□□ 1.62
SUSD1-204ENST00000374270 ZNF692Q9BU19 519 aaPredicted RBP25.16■■□□□ 1.62
SUSD1-204ENST00000374270 FOXD4L1Q9NU39 408 aa25.16■■□□□ 1.62
SUSD1-204ENST00000374270 LRRC7Q96NW7 1537 aa25.16■■□□□ 1.62
SUSD1-204ENST00000374270 BECN1Q14457 450 aa25.16■■□□□ 1.62
SUSD1-204ENST00000374270 IL16Q14005 1332 aa25.15■■□□□ 1.62
SUSD1-204ENST00000374270 EDC4Q6P2E9 1401 aaKnown RBP25.14■■□□□ 1.62
SUSD1-204ENST00000374270 USHBP1Q8N6Y0 703 aa25.14■■□□□ 1.62
SUSD1-204ENST00000374270 CALD1Q05682 793 aaKnown RBP25.13■■□□□ 1.61
SUSD1-204ENST00000374270 IFT57Q9NWB7 429 aa25.12■■□□□ 1.61
SUSD1-204ENST00000374270 CFAP44Q96MT7 982 aa25.12■■□□□ 1.61
SUSD1-204ENST00000374270 C22orf23Q9BZE7 217 aa25.12■■□□□ 1.61
SUSD1-204ENST00000374270 XPCQ01831 940 aaPredicted RBP25.11■■□□□ 1.61
SUSD1-204ENST00000374270 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
SUSD1-204ENST00000374270 FAM135BQ49AJ0 1406 aa25.1■■□□□ 1.61
SUSD1-204ENST00000374270 F6X3S4 739 aa25.1■■□□□ 1.61
SUSD1-204ENST00000374270 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
SUSD1-204ENST00000374270 USP32Q8NFA0 1604 aa25.1■■□□□ 1.61
SUSD1-204ENST00000374270 CHD1LQ86WJ1 897 aa25.1■■□□□ 1.61
SUSD1-204ENST00000374270 ZBTB7BO15156 539 aaPredicted RBP25.09■■□□□ 1.61
SUSD1-204ENST00000374270 LMOD3Q0VAK6 560 aa25.09■■□□□ 1.61
SUSD1-204ENST00000374270 TBC1D2Q9BYX2 928 aa25.09■■□□□ 1.61
SUSD1-204ENST00000374270 MAP3K19Q56UN5 1328 aa25.08■■□□□ 1.61
SUSD1-204ENST00000374270 KCNA6P17658 529 aa25.08■■□□□ 1.61
SUSD1-204ENST00000374270 HDAC1Q13547 482 aaPredicted RBP25.08■■□□□ 1.61
SUSD1-204ENST00000374270 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
SUSD1-204ENST00000374270 IL27Q8NEV9 243 aa25.08■■□□□ 1.6
SUSD1-204ENST00000374270 ZNF428Q96B54 188 aa25.08■■□□□ 1.6
SUSD1-204ENST00000374270 SLC4A2P04920 1241 aa25.07■■□□□ 1.6
SUSD1-204ENST00000374270 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
SUSD1-204ENST00000374270 TBC1D32Q96NH3 1257 aa25.07■■□□□ 1.6
SUSD1-204ENST00000374270 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
SUSD1-204ENST00000374270 ATP7BP35670 1465 aa25.06■■□□□ 1.6
SUSD1-204ENST00000374270 ABTB2Q8N961 1025 aa25.06■■□□□ 1.6
SUSD1-204ENST00000374270 TSPYL4Q9UJ04 414 aa25.06■■□□□ 1.6
SUSD1-204ENST00000374270 SMARCA5O60264 1052 aaPredicted RBP25.06■■□□□ 1.6
SUSD1-204ENST00000374270 AAMPQ13685 434 aa25.06■■□□□ 1.6
SUSD1-204ENST00000374270 MTHFSDQ2M296 383 aaKnown RBP25.06■■□□□ 1.6
SUSD1-204ENST00000374270 SMC5Q8IY18 1101 aa25.05■■□□□ 1.6
SUSD1-204ENST00000374270 GZF1Q9H116 711 aaPredicted RBP25.05■■□□□ 1.6
SUSD1-204ENST00000374270 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
SUSD1-204ENST00000374270 SIRT2Q8IXJ6 389 aa25.04■■□□□ 1.6
SUSD1-204ENST00000374270 ADGRB2O60241 1585 aa25.03■■□□□ 1.6
SUSD1-204ENST00000374270 NUCB1Q02818 461 aa25.02■■□□□ 1.6
SUSD1-204ENST00000374270 GSE1Q14687 1217 aa25.02■■□□□ 1.6
SUSD1-204ENST00000374270 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
SUSD1-204ENST00000374270 G2E3Q7L622 706 aa25.01■■□□□ 1.59
SUSD1-204ENST00000374270 EYA1Q99502 592 aa25.01■■□□□ 1.59
SUSD1-204ENST00000374270 AGLP35573 1532 aa25.01■■□□□ 1.59
SUSD1-204ENST00000374270 ZNF853P0CG23 659 aa25■■□□□ 1.59
SUSD1-204ENST00000374270 MED14O60244 1454 aa25■■□□□ 1.59
SUSD1-204ENST00000374270 OTUD7AQ8TE49 926 aaPredicted RBP25■■□□□ 1.59
SUSD1-204ENST00000374270 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
SUSD1-204ENST00000374270 API5Q9BZZ5 524 aaKnown RBP24.99■■□□□ 1.59
SUSD1-204ENST00000374270 BRPF3Q9ULD4 1205 aa24.99■■□□□ 1.59
SUSD1-204ENST00000374270 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
SUSD1-204ENST00000374270 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
SUSD1-204ENST00000374270 MEIS3Q99687 375 aa24.99■■□□□ 1.59
SUSD1-204ENST00000374270 PTPRUQ92729 1446 aa24.98■■□□□ 1.59
SUSD1-204ENST00000374270 NCBP3Q53F19 620 aaKnown RBP24.97■■□□□ 1.59
SUSD1-204ENST00000374270 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
SUSD1-204ENST00000374270 TSHZ3Q63HK5 1081 aa24.96■■□□□ 1.59
SUSD1-204ENST00000374270 PLEKHG3A1L390 1219 aa24.95■■□□□ 1.59
SUSD1-204ENST00000374270 EIF2S2P20042 333 aaKnown RBP24.95■■□□□ 1.58
SUSD1-204ENST00000374270 ESCO1Q5FWF5 840 aa24.95■■□□□ 1.58
SUSD1-204ENST00000374270 HSCBQ8IWL3 235 aa24.93■■□□□ 1.58
SUSD1-204ENST00000374270 AATKQ6ZMQ8 1374 aa24.93■■□□□ 1.58
SUSD1-204ENST00000374270 KIF20BQ96Q89 1820 aa24.93■■□□□ 1.58
SUSD1-204ENST00000374270 DLC1Q96QB1 1528 aa24.92■■□□□ 1.58
SUSD1-204ENST00000374270 FKBP5Q13451 457 aaPredicted RBP24.92■■□□□ 1.58
SUSD1-204ENST00000374270 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
SUSD1-204ENST00000374270 CHL1O00533 1208 aa24.91■■□□□ 1.58
SUSD1-204ENST00000374270 USP6P35125 1406 aa24.91■■□□□ 1.58
SUSD1-204ENST00000374270 CDK12Q9NYV4 1490 aaPredicted RBP24.91■■□□□ 1.58
SUSD1-204ENST00000374270 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
SUSD1-204ENST00000374270 TBC1D9Q6ZT07 1266 aa24.9■■□□□ 1.58
SUSD1-204ENST00000374270 PSME1Q06323 249 aa24.89■■□□□ 1.57
SUSD1-204ENST00000374270 GCC1Q96CN9 775 aa24.88■■□□□ 1.57
SUSD1-204ENST00000374270 SIRT1Q96EB6 747 aa24.88■■□□□ 1.57
SUSD1-204ENST00000374270 EXOC6BQ9Y2D4 811 aa24.88■■□□□ 1.57
SUSD1-204ENST00000374270 ABCC4O15439 1325 aa24.88■■□□□ 1.57
SUSD1-204ENST00000374270 ARHGAP45Q92619 1136 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms