RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
A1CF-205ENST00000374001 PLIN1O60240 522 aa6.34□□□□□ -1.39
A1CF-205ENST00000374001 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
A1CF-205ENST00000374001 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
A1CF-205ENST00000374001 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.34□□□□□ -1.39
A1CF-205ENST00000374001 GPS2Q13227 327 aa6.34□□□□□ -1.4
A1CF-205ENST00000374001 TBC1D2BQ9UPU7 963 aa6.34□□□□□ -1.4
A1CF-205ENST00000374001 ABCA8O94911 1581 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 GNL3LQ9NVN8 582 aaKnown RBP6.33□□□□□ -1.4
A1CF-205ENST00000374001 ZMYM4Q5VZL5 1548 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 TSPOAP1O95153 1857 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 CCP110O43303 1012 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 AEBP1Q8IUX7 1158 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 PIP4K2AP48426 406 aaPredicted RBP6.33□□□□□ -1.4
A1CF-205ENST00000374001 MRE11P49959 708 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 SPRYD3Q8NCJ5 442 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 CABP1Q9NZU7 370 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 ANO2Q9NQ90 1003 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 PARD3Q8TEW0 1356 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.33□□□□□ -1.4
A1CF-205ENST00000374001 LRRCC1Q9C099 1032 aa6.33□□□□□ -1.4
A1CF-205ENST00000374001 CCDC9Q9Y3X0 531 aaKnown RBP6.33□□□□□ -1.4
A1CF-205ENST00000374001 CCDC73Q6ZRK6 1079 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 SYNMO15061 1565 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
A1CF-205ENST00000374001 IQGAP3Q86VI3 1631 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
A1CF-205ENST00000374001 BACH2Q9BYV9 841 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 TRPM2O94759 1503 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 HMOX1P09601 288 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 HDGFL1Q5TGJ6 251 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 EIF2S2P20042 333 aaKnown RBP6.32□□□□□ -1.4
A1CF-205ENST00000374001 NOS1P29475 1434 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 ARHGAP45Q92619 1136 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 MAP7D2Q96T17 732 aa6.32□□□□□ -1.4
A1CF-205ENST00000374001 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
A1CF-205ENST00000374001 TPD52L1Q16890 204 aaPredicted RBP6.32□□□□□ -1.4
A1CF-205ENST00000374001 NUTM2FA1L443 756 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 GNAT3A8MTJ3 354 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 PANK1Q8TE04 598 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 POLR3AO14802 1390 aaPredicted RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 LAMC1P11047 1609 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 CDKL5O76039 1030 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 NUDT16Q96DE0 195 aaKnown RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 RAPGEF3O95398 923 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 ZNF396Q96N95 335 aaPredicted RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 TRIM34Q9BYJ4 488 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 LNPKQ9C0E8 428 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 CTNNA3Q9UI47 895 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 HECW2Q9P2P5 1572 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 WDR33Q9C0J8 1336 aaKnown RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 CEP152O94986 1710 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 WASLO00401 505 aaPredicted RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 ZCCHC11Q5TAX3 1644 aaKnown RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 PPIP5K1Q6PFW1 1433 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 SASS6Q6UVJ0 657 aa6.31□□□□□ -1.4
A1CF-205ENST00000374001 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
A1CF-205ENST00000374001 ZSCAN31Q96LW9 406 aaPredicted RBP6.3□□□□□ -1.4
A1CF-205ENST00000374001 CEP89Q96ST8 783 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 TTC37Q6PGP7 1564 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 SBNO2Q9Y2G9 1366 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 SULT6B1Q6IMI4 303 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 CLASP1Q7Z460 1538 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 AK9Q5TCS8 1911 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 CHD1LQ86WJ1 897 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 NOC3LQ8WTT2 800 aaKnown RBP6.3□□□□□ -1.4
A1CF-205ENST00000374001 NOB1Q9ULX3 412 aaKnown RBP6.3□□□□□ -1.4
A1CF-205ENST00000374001 TNRQ92752 1358 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 MAGI2Q86UL8 1455 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 HMGN5P82970 282 aaKnown RBP6.3□□□□□ -1.4
A1CF-205ENST00000374001 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 PZPP20742 1482 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 MARCH6O60337 910 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 EXOSC9Q06265 439 aaKnown RBP6.3□□□□□ -1.4
A1CF-205ENST00000374001 DMRT2Q9Y5R5 561 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 ABCC1P33527 1531 aa6.3□□□□□ -1.4
A1CF-205ENST00000374001 APPP05067 770 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 HYPKQ9NX55 129 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 CFAP45Q9UL16 551 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 CAVIN2O95810 425 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 CCDC158Q5M9N0 1113 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 CCDC39Q9UFE4 941 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
A1CF-205ENST00000374001 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
A1CF-205ENST00000374001 SLC4A2P04920 1241 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 CAVIN1Q6NZI2 390 aaKnown RBP6.29□□□□□ -1.4
A1CF-205ENST00000374001 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 MCTP1Q6DN14 999 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 TXLNAP40222 546 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 HSP90AB3PQ58FF7 597 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 ZNF530Q6P9A1 599 aaPredicted RBP6.29□□□□□ -1.4
A1CF-205ENST00000374001 TEX13AQ9BXU3 409 aaPredicted RBP6.29□□□□□ -1.4
A1CF-205ENST00000374001 CYP46A1Q9Y6A2 500 aa6.29□□□□□ -1.4
A1CF-205ENST00000374001 KIAA1210Q9ULL0 1709 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms