RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
RBBP4-201ENST00000373485 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
RBBP4-201ENST00000373485 LRP6O75581 1613 aa12.69□□□□□ -0.38
RBBP4-201ENST00000373485 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
RBBP4-201ENST00000373485 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
RBBP4-201ENST00000373485 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
RBBP4-201ENST00000373485 MED1Q15648 1581 aaPredicted RBP12.67□□□□□ -0.38
RBBP4-201ENST00000373485 SOX12O15370 315 aa12.66□□□□□ -0.38
RBBP4-201ENST00000373485 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
RBBP4-201ENST00000373485 FYB1O15117 783 aa12.65□□□□□ -0.38
RBBP4-201ENST00000373485 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
RBBP4-201ENST00000373485 C8orf37Q96NL8 207 aa12.65□□□□□ -0.38
RBBP4-201ENST00000373485 USP19O94966 1318 aa12.65□□□□□ -0.38
RBBP4-201ENST00000373485 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 ZBTB7CA1YPR0 619 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
RBBP4-201ENST00000373485 GCP02774 474 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
RBBP4-201ENST00000373485 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
RBBP4-201ENST00000373485 COG3Q96JB2 828 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 KNSTRNQ9Y448 316 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
RBBP4-201ENST00000373485 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
RBBP4-201ENST00000373485 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
RBBP4-201ENST00000373485 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
RBBP4-201ENST00000373485 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
RBBP4-201ENST00000373485 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
RBBP4-201ENST00000373485 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
RBBP4-201ENST00000373485 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
RBBP4-201ENST00000373485 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
RBBP4-201ENST00000373485 CLCN6P51797 869 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 PRDM11Q9NQV5 511 aa12.62□□□□□ -0.39
RBBP4-201ENST00000373485 SLIT3O75094 1523 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 FBLN1P23142 703 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
RBBP4-201ENST00000373485 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
RBBP4-201ENST00000373485 AFF2P51816 1311 aa12.6□□□□□ -0.39
RBBP4-201ENST00000373485 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
RBBP4-201ENST00000373485 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
RBBP4-201ENST00000373485 USP54Q70EL1 1684 aa12.59□□□□□ -0.39
RBBP4-201ENST00000373485 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
RBBP4-201ENST00000373485 USP21Q9UK80 565 aa12.58□□□□□ -0.4
RBBP4-201ENST00000373485 NFAT5O94916 1531 aa12.57□□□□□ -0.4
RBBP4-201ENST00000373485 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
RBBP4-201ENST00000373485 MORC1Q86VD1 984 aa12.57□□□□□ -0.4
RBBP4-201ENST00000373485 ARHGEF25Q86VW2 580 aa12.57□□□□□ -0.4
RBBP4-201ENST00000373485 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
RBBP4-201ENST00000373485 CPDO75976 1380 aa12.57□□□□□ -0.4
RBBP4-201ENST00000373485 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
RBBP4-201ENST00000373485 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
RBBP4-201ENST00000373485 NSD2O96028 1365 aa12.56□□□□□ -0.4
RBBP4-201ENST00000373485 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
RBBP4-201ENST00000373485 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
RBBP4-201ENST00000373485 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
RBBP4-201ENST00000373485 SLIT2O94813 1529 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 GSE1Q14687 1217 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
RBBP4-201ENST00000373485 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
RBBP4-201ENST00000373485 AMPHP49418 695 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 EVA1CP58658 441 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
RBBP4-201ENST00000373485 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
RBBP4-201ENST00000373485 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
RBBP4-201ENST00000373485 LTN1O94822 1766 aa12.53□□□□□ -0.4
RBBP4-201ENST00000373485 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
RBBP4-201ENST00000373485 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
RBBP4-201ENST00000373485 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
RBBP4-201ENST00000373485 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.41
RBBP4-201ENST00000373485 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
RBBP4-201ENST00000373485 COL18A1P39060 1754 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 HOXC9P31274 260 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 IP6K1Q92551 441 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 LTV1Q96GA3 475 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-201ENST00000373485 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
RBBP4-201ENST00000373485 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
RBBP4-201ENST00000373485 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
RBBP4-201ENST00000373485 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
RBBP4-201ENST00000373485 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
RBBP4-201ENST00000373485 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
RBBP4-201ENST00000373485 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
RBBP4-201ENST00000373485 GABBR2O75899 941 aa12.49□□□□□ -0.41
RBBP4-201ENST00000373485 VPS72Q15906 364 aa12.49□□□□□ -0.41
RBBP4-201ENST00000373485 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
RBBP4-201ENST00000373485 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms