RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 SPATA31D1Q6ZQQ2 1576 aa13.94□□□□□ -0.18
RPRD1B-201ENST00000373433 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
RPRD1B-201ENST00000373433 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
RPRD1B-201ENST00000373433 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 TPM2P07951 284 aa13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 ARID3AQ99856 593 aa13.93□□□□□ -0.18
RPRD1B-201ENST00000373433 ELL2O00472 640 aaPredicted RBP13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 TNNQ9UQP3 1299 aa13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 ZC3H6P61129 1189 aaKnown RBP13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 TRMT2AQ8IZ69 625 aaKnown RBP13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 MSH6P52701 1360 aa13.92□□□□□ -0.18
RPRD1B-201ENST00000373433 KRT28Q7Z3Y7 464 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 NGEFQ8N5V2 710 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 ORAI2Q96SN7 254 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 PDCL3Q9H2J4 239 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 PODXL2Q9NZ53 605 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
RPRD1B-201ENST00000373433 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
RPRD1B-201ENST00000373433 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
RPRD1B-201ENST00000373433 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
RPRD1B-201ENST00000373433 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
RPRD1B-201ENST00000373433 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.19
RPRD1B-201ENST00000373433 EVA1CP58658 441 aa13.9□□□□□ -0.19
RPRD1B-201ENST00000373433 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.19
RPRD1B-201ENST00000373433 RLBP1P12271 317 aa13.89□□□□□ -0.19
RPRD1B-201ENST00000373433 HSP90AB1P08238 724 aaKnown RBP13.89□□□□□ -0.19
RPRD1B-201ENST00000373433 PTPRMP28827 1452 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 NRXN1Q9ULB1 1477 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 SETBP1Q9Y6X0 1596 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 PIP4K2BP78356 416 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 FER1L4A9Z1Z3 1794 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 FAM135BQ49AJ0 1406 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
RPRD1B-201ENST00000373433 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 PRR36Q9H6K5 1346 aa13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 SETD1BQ9UPS6 1966 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 FCHSD2O94868 740 aa13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-201ENST00000373433 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
RPRD1B-201ENST00000373433 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
RPRD1B-201ENST00000373433 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
RPRD1B-201ENST00000373433 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 PRDM11Q9NQV5 511 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 PIK3R4Q99570 1358 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 EDC4Q6P2E9 1401 aaKnown RBP13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 NEURL4Q96JN8 1562 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 PPLO60437 1756 aa13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 NASPP49321 788 aaPredicted RBP13.85□□□□□ -0.19
RPRD1B-201ENST00000373433 RARSP54136 660 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-201ENST00000373433 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
RPRD1B-201ENST00000373433 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
RPRD1B-201ENST00000373433 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
RPRD1B-201ENST00000373433 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-201ENST00000373433 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
RPRD1B-201ENST00000373433 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-201ENST00000373433 LAMC1P11047 1609 aa13.83□□□□□ -0.2
RPRD1B-201ENST00000373433 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
RPRD1B-201ENST00000373433 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-201ENST00000373433 TEFQ10587 303 aa13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 ZSCAN30Q86W11 494 aa13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 NCLP19338 710 aaKnown RBP13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 DDX17Q92841 729 aaKnown RBP13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
RPRD1B-201ENST00000373433 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 CEP170BQ9Y4F5 1589 aaPredicted RBP13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 NPHP1O15259 732 aa13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
RPRD1B-201ENST00000373433 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 GNAI1P63096 354 aa13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
RPRD1B-201ENST00000373433 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
RPRD1B-201ENST00000373433 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms