RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 NAP1L5Q96NT1 182 aaPredicted RBP6.34□□□□□ -1.39
ATRX-201ENST00000373344 LRP2BPQ9P2M1 347 aa6.34□□□□□ -1.39
ATRX-201ENST00000373344 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.4
ATRX-201ENST00000373344 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATRX-201ENST00000373344 RPGRQ92834 1020 aaKnown RBP6.33□□□□□ -1.4
ATRX-201ENST00000373344 SART3Q15020 963 aaKnown RBP6.33□□□□□ -1.4
ATRX-201ENST00000373344 CDCA7LQ96GN5 454 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 RBM19Q9Y4C8 960 aaKnown RBP6.33□□□□□ -1.4
ATRX-201ENST00000373344 ATAD2Q6PL18 1390 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 NME9Q86XW9 330 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 CCDC47Q96A33 483 aaKnown RBP6.33□□□□□ -1.4
ATRX-201ENST00000373344 ANKRD30BQ9BXX2 1392 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 LMTK3Q96Q04 1460 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 PRXQ9BXM0 1461 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 GPTP24298 496 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 WASLO00401 505 aaPredicted RBP6.33□□□□□ -1.4
ATRX-201ENST00000373344 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATRX-201ENST00000373344 FAM135AQ9P2D6 1515 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 BRMS1Q9HCU9 246 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 ADGRF5Q8IZF2 1346 aa6.33□□□□□ -1.4
ATRX-201ENST00000373344 NBPF8Q3BBV2 869 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 BECN2A8MW95 431 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 PTMSP20962 102 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 ATP6V1DQ9Y5K8 247 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 ASXL2Q76L83 1435 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 ZBED9Q6R2W3 1325 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 VPS37CA5D8V6 355 aaPredicted RBP6.32□□□□□ -1.4
ATRX-201ENST00000373344 SRGAP3O43295 1099 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 ATP2B1P20020 1258 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 CAVIN4Q5BKX8 364 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 SRCIN1Q9C0H9 1055 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 CAMSAP2Q08AD1 1489 aa6.32□□□□□ -1.4
ATRX-201ENST00000373344 WDHD1O75717 1129 aaPredicted RBP6.31□□□□□ -1.4
ATRX-201ENST00000373344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATRX-201ENST00000373344 TRMT112Q9UI30 125 aaKnown RBP6.31□□□□□ -1.4
ATRX-201ENST00000373344 ACEP12821 1306 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 IDH1O75874 414 aaKnown RBP6.31□□□□□ -1.4
ATRX-201ENST00000373344 CEP126Q9P2H0 1117 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 TNRQ92752 1358 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 SMC3Q9UQE7 1217 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 NSD3Q9BZ95 1437 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 DDB1Q16531 1140 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 TIAM1Q13009 1591 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 C6orf229H3BNL8 230 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 AMOTQ4VCS5 1084 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 BICD2Q8TD16 824 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 TEX14Q8IWB6 1497 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 ERC1Q8IUD2 1116 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 MYD88Q99836 296 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 FBLN1P23142 703 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 TMOD2Q9NZR1 351 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 FBXO3Q9UK99 471 aa6.31□□□□□ -1.4
ATRX-201ENST00000373344 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
ATRX-201ENST00000373344 BCAR3O75815 825 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 CLEC11AQ9Y240 323 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 DDX49Q9Y6V7 483 aaKnown RBP6.3□□□□□ -1.4
ATRX-201ENST00000373344 CFAP65Q6ZU64 1925 aaKnown RBP6.3□□□□□ -1.4
ATRX-201ENST00000373344 TPM3P06753 285 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 NPHP3Q7Z494 1330 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
ATRX-201ENST00000373344 ATP6V1AP38606 617 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 THUMPD2Q9BTF0 503 aaKnown RBP6.3□□□□□ -1.4
ATRX-201ENST00000373344 LRRCC1Q9C099 1032 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 USP5P45974 858 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 EPS15P42566 896 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 CCT4P50991 539 aaKnown RBP6.3□□□□□ -1.4
ATRX-201ENST00000373344 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 ZBTB3Q9H5J0 574 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 TFCP2L1Q9NZI6 479 aa6.3□□□□□ -1.4
ATRX-201ENST00000373344 TDO2P48775 406 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 NUP133Q8WUM0 1156 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 PIBF1Q8WXW3 757 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 IL1RAPL2Q9NP60 686 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 EMILIN1Q9Y6C2 1016 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
ATRX-201ENST00000373344 HOOK1Q9UJC3 728 aaKnown RBP6.29□□□□□ -1.4
ATRX-201ENST00000373344 FCHSD2O94868 740 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 PSMA5P28066 241 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 TAF7Q15545 349 aaPredicted RBP6.29□□□□□ -1.4
ATRX-201ENST00000373344 IFNL2Q8IZJ0 200 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
ATRX-201ENST00000373344 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 ZSCAN25Q6NSZ9 544 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
ATRX-201ENST00000373344 ODF2Q5BJF6 829 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 MKNK2Q9HBH9 465 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 SLC4A8Q2Y0W8 1093 aa6.29□□□□□ -1.4
ATRX-201ENST00000373344 TPM1P09493 284 aa6.28□□□□□ -1.4
ATRX-201ENST00000373344 MINDY4BA8MYZ0 360 aa6.28□□□□□ -1.4
ATRX-201ENST00000373344 LRRC59Q96AG4 307 aaKnown RBP6.28□□□□□ -1.4
ATRX-201ENST00000373344 KIF21AQ7Z4S6 1674 aa6.28□□□□□ -1.4
ATRX-201ENST00000373344 PTPN23Q9H3S7 1636 aa6.28□□□□□ -1.4
ATRX-201ENST00000373344 CCDC69A6NI79 296 aa6.28□□□□□ -1.4
ATRX-201ENST00000373344 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms