RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 LMBRD1Q9NUN5 540 aa12.83□□□□□ -0.35
TRERF1-203ENST00000372917 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
TRERF1-203ENST00000372917 A0A1B0GUL7 405 aa12.83□□□□□ -0.36
TRERF1-203ENST00000372917 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
TRERF1-203ENST00000372917 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
TRERF1-203ENST00000372917 TMEM63CQ9P1W3 806 aa12.83□□□□□ -0.36
TRERF1-203ENST00000372917 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 REC8O95072 547 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 ADCY5O95622 1261 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 CWC15Q9P013 229 aaKnown RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
TRERF1-203ENST00000372917 ZNF446Q9NWS9 450 aa12.82□□□□□ -0.36
TRERF1-203ENST00000372917 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 GPT2Q8TD30 523 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 DNMT1P26358 1616 aaKnown RBP12.81□□□□□ -0.36
TRERF1-203ENST00000372917 PZPP20742 1482 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
TRERF1-203ENST00000372917 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
TRERF1-203ENST00000372917 TMF1P82094 1093 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 GOLGA2Q08379 1002 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 SNX21Q969T3 373 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
TRERF1-203ENST00000372917 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
TRERF1-203ENST00000372917 TXLNBQ8N3L3 684 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 SPC24Q8NBT2 197 aa12.81□□□□□ -0.36
TRERF1-203ENST00000372917 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 KDM5CP41229 1560 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 KIF1CO43896 1103 aaKnown RBP12.8□□□□□ -0.36
TRERF1-203ENST00000372917 RPAINQ86UA6 219 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
TRERF1-203ENST00000372917 PYCARDQ9ULZ3 195 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 HNRNPMP52272 730 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRERF1-203ENST00000372917 KMT5BQ4FZB7 885 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
TRERF1-203ENST00000372917 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 MAP2K2P36507 400 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
TRERF1-203ENST00000372917 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
TRERF1-203ENST00000372917 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
TRERF1-203ENST00000372917 CALRP27797 417 aaKnown RBP12.78□□□□□ -0.36
TRERF1-203ENST00000372917 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
TRERF1-203ENST00000372917 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
TRERF1-203ENST00000372917 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
TRERF1-203ENST00000372917 RRP15Q9Y3B9 282 aaKnown RBP12.78□□□□□ -0.36
TRERF1-203ENST00000372917 IQGAP2Q13576 1575 aa12.77□□□□□ -0.36
TRERF1-203ENST00000372917 GPS2Q13227 327 aa12.77□□□□□ -0.36
TRERF1-203ENST00000372917 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
TRERF1-203ENST00000372917 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRERF1-203ENST00000372917 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.37
TRERF1-203ENST00000372917 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
TRERF1-203ENST00000372917 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.37
TRERF1-203ENST00000372917 NUCB2P80303 420 aa12.77□□□□□ -0.37
TRERF1-203ENST00000372917 MED4Q9NPJ6 270 aa12.77□□□□□ -0.37
TRERF1-203ENST00000372917 SYCP1Q15431 976 aa12.76□□□□□ -0.37
TRERF1-203ENST00000372917 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
TRERF1-203ENST00000372917 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
TRERF1-203ENST00000372917 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
TRERF1-203ENST00000372917 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
TRERF1-203ENST00000372917 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
TRERF1-203ENST00000372917 SCAPERQ9BY12 1400 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 INSRP06213 1382 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
TRERF1-203ENST00000372917 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
TRERF1-203ENST00000372917 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 FBXO38Q6PIJ6 1188 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 PSMD1Q99460 953 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 H0YHG0 523 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
TRERF1-203ENST00000372917 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 WDR62O43379 1518 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 CAMSAP2Q08AD1 1489 aa12.75□□□□□ -0.37
TRERF1-203ENST00000372917 PKP1Q13835 747 aa12.74□□□□□ -0.37
TRERF1-203ENST00000372917 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
TRERF1-203ENST00000372917 SRLQ86TD4 932 aa12.74□□□□□ -0.37
TRERF1-203ENST00000372917 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
TRERF1-203ENST00000372917 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
TRERF1-203ENST00000372917 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
TRERF1-203ENST00000372917 ELF2Q15723 593 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms