RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
RLF-201ENST00000372771 MCM10Q7L590 875 aa17.8■□□□□ 0.44
RLF-201ENST00000372771 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
RLF-201ENST00000372771 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
RLF-201ENST00000372771 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
RLF-201ENST00000372771 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
RLF-201ENST00000372771 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
RLF-201ENST00000372771 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
RLF-201ENST00000372771 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
RLF-201ENST00000372771 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 AACSQ86V21 672 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 TTLL5Q6EMB2 1281 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 CWC27Q6UX04 472 aaKnown RBP17.78■□□□□ 0.44
RLF-201ENST00000372771 BTBD11A6QL63 1104 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 HIP1O00291 1037 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 FCHSD2O94868 740 aa17.78■□□□□ 0.44
RLF-201ENST00000372771 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
RLF-201ENST00000372771 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
RLF-201ENST00000372771 MCM2P49736 904 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 SMARCA5O60264 1052 aaPredicted RBP17.77■□□□□ 0.44
RLF-201ENST00000372771 NAT10Q9H0A0 1025 aaKnown RBP17.77■□□□□ 0.44
RLF-201ENST00000372771 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 SMC2O95347 1197 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
RLF-201ENST00000372771 MBD3O95983 291 aa17.77■□□□□ 0.43
RLF-201ENST00000372771 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.43
RLF-201ENST00000372771 GPS2Q13227 327 aa17.77■□□□□ 0.43
RLF-201ENST00000372771 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.43
RLF-201ENST00000372771 KLHL34Q8N239 644 aa17.77■□□□□ 0.43
RLF-201ENST00000372771 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.43
RLF-201ENST00000372771 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
RLF-201ENST00000372771 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
RLF-201ENST00000372771 KINO60870 393 aaKnown RBP17.76■□□□□ 0.43
RLF-201ENST00000372771 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
RLF-201ENST00000372771 MNS1Q8NEH6 495 aa17.75■□□□□ 0.43
RLF-201ENST00000372771 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
RLF-201ENST00000372771 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
RLF-201ENST00000372771 XBP1P17861 261 aa17.74■□□□□ 0.43
RLF-201ENST00000372771 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
RLF-201ENST00000372771 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
RLF-201ENST00000372771 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
RLF-201ENST00000372771 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
RLF-201ENST00000372771 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
RLF-201ENST00000372771 LETM1O95202 739 aaPredicted RBP17.73■□□□□ 0.43
RLF-201ENST00000372771 RARSP54136 660 aaKnown RBP17.73■□□□□ 0.43
RLF-201ENST00000372771 STK38Q15208 465 aa17.73■□□□□ 0.43
RLF-201ENST00000372771 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
RLF-201ENST00000372771 NME9Q86XW9 330 aa17.73■□□□□ 0.43
RLF-201ENST00000372771 PDCP20941 246 aa17.72■□□□□ 0.43
RLF-201ENST00000372771 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
RLF-201ENST00000372771 CCDC43Q96MW1 224 aaKnown RBP17.72■□□□□ 0.43
RLF-201ENST00000372771 KIF14Q15058 1648 aa17.72■□□□□ 0.43
RLF-201ENST00000372771 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
RLF-201ENST00000372771 CWC22Q9HCG8 908 aaKnown RBP17.72■□□□□ 0.43
RLF-201ENST00000372771 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
RLF-201ENST00000372771 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
RLF-201ENST00000372771 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 CUL7Q14999 1698 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
RLF-201ENST00000372771 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
RLF-201ENST00000372771 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
RLF-201ENST00000372771 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
RLF-201ENST00000372771 ZNF396Q96N95 335 aaPredicted RBP17.7■□□□□ 0.42
RLF-201ENST00000372771 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
RLF-201ENST00000372771 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
RLF-201ENST00000372771 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
RLF-201ENST00000372771 F6X3S4 739 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 TNMDQ9H2S6 317 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 ME1P48163 572 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 MCM4P33991 863 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.42
RLF-201ENST00000372771 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
RLF-201ENST00000372771 NCOA1Q15788 1441 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 EPS15P42566 896 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
RLF-201ENST00000372771 TEX35Q5T0J7 233 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
RLF-201ENST00000372771 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
RLF-201ENST00000372771 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
RLF-201ENST00000372771 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
RLF-201ENST00000372771 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
RLF-201ENST00000372771 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
RLF-201ENST00000372771 ARGLU1Q9NWB6 273 aaPredicted RBP17.65■□□□□ 0.42
RLF-201ENST00000372771 CCDC192P0DO97 292 aa17.65■□□□□ 0.42
RLF-201ENST00000372771 ATP2B2Q01814 1243 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms