RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SSFA2P28290 1259 aa18.45■□□□□ 0.54
COL9A2-202ENST00000372748 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
COL9A2-202ENST00000372748 CIZ1Q9ULV3 898 aaPredicted RBP18.45■□□□□ 0.54
COL9A2-202ENST00000372748 PREX1Q8TCU6 1659 aa18.45■□□□□ 0.54
COL9A2-202ENST00000372748 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
COL9A2-202ENST00000372748 HMOX1P09601 288 aa18.44■□□□□ 0.54
COL9A2-202ENST00000372748 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
COL9A2-202ENST00000372748 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
COL9A2-202ENST00000372748 DIP2BQ9P265 1576 aa18.44■□□□□ 0.54
COL9A2-202ENST00000372748 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
COL9A2-202ENST00000372748 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
COL9A2-202ENST00000372748 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
COL9A2-202ENST00000372748 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
COL9A2-202ENST00000372748 SKOR2Q2VWA4 1001 aaPredicted RBP18.42■□□□□ 0.54
COL9A2-202ENST00000372748 PKNOX2Q96KN3 472 aa18.42■□□□□ 0.54
COL9A2-202ENST00000372748 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
COL9A2-202ENST00000372748 ZMYND15Q9H091 742 aa18.42■□□□□ 0.54
COL9A2-202ENST00000372748 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
COL9A2-202ENST00000372748 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
COL9A2-202ENST00000372748 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-202ENST00000372748 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
COL9A2-202ENST00000372748 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
COL9A2-202ENST00000372748 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-202ENST00000372748 ZRANB1Q9UGI0 708 aa18.39■□□□□ 0.53
COL9A2-202ENST00000372748 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
COL9A2-202ENST00000372748 IL16Q14005 1332 aa18.38■□□□□ 0.53
COL9A2-202ENST00000372748 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
COL9A2-202ENST00000372748 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
COL9A2-202ENST00000372748 FCHSD2O94868 740 aa18.38■□□□□ 0.53
COL9A2-202ENST00000372748 PNPLA6Q8IY17 1366 aa18.38■□□□□ 0.53
COL9A2-202ENST00000372748 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
COL9A2-202ENST00000372748 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
COL9A2-202ENST00000372748 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
COL9A2-202ENST00000372748 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
COL9A2-202ENST00000372748 NME9Q86XW9 330 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 MED14O60244 1454 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 CCDC173Q0VFZ6 552 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
COL9A2-202ENST00000372748 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
COL9A2-202ENST00000372748 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
COL9A2-202ENST00000372748 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
COL9A2-202ENST00000372748 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
COL9A2-202ENST00000372748 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
COL9A2-202ENST00000372748 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
COL9A2-202ENST00000372748 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
COL9A2-202ENST00000372748 ANP32BQ92688 251 aaKnown RBP18.34■□□□□ 0.53
COL9A2-202ENST00000372748 PTMSP20962 102 aa18.33■□□□□ 0.53
COL9A2-202ENST00000372748 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.53
COL9A2-202ENST00000372748 KLHL40Q2TBA0 621 aa18.33■□□□□ 0.52
COL9A2-202ENST00000372748 ZSCAN30Q86W11 494 aa18.32■□□□□ 0.52
COL9A2-202ENST00000372748 PKP1Q13835 747 aa18.32■□□□□ 0.52
COL9A2-202ENST00000372748 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
COL9A2-202ENST00000372748 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
COL9A2-202ENST00000372748 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
COL9A2-202ENST00000372748 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
COL9A2-202ENST00000372748 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
COL9A2-202ENST00000372748 GSPT1P15170 499 aaKnown RBP18.31■□□□□ 0.52
COL9A2-202ENST00000372748 CDC45O75419 566 aa18.31■□□□□ 0.52
COL9A2-202ENST00000372748 TPM2P07951 284 aa18.31■□□□□ 0.52
COL9A2-202ENST00000372748 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
COL9A2-202ENST00000372748 RIMS2Q9UQ26 1411 aa18.3■□□□□ 0.52
COL9A2-202ENST00000372748 VAMP4O75379 141 aa18.3■□□□□ 0.52
COL9A2-202ENST00000372748 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
COL9A2-202ENST00000372748 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
COL9A2-202ENST00000372748 MAP2P11137 1827 aaKnown RBP18.3■□□□□ 0.52
COL9A2-202ENST00000372748 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
COL9A2-202ENST00000372748 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
COL9A2-202ENST00000372748 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
COL9A2-202ENST00000372748 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
COL9A2-202ENST00000372748 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
COL9A2-202ENST00000372748 IL13P35225 146 aa18.28■□□□□ 0.52
COL9A2-202ENST00000372748 DCTN1Q14203 1278 aa18.28■□□□□ 0.52
COL9A2-202ENST00000372748 C16orf71Q8IYS4 520 aaPredicted RBP18.28■□□□□ 0.52
COL9A2-202ENST00000372748 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
COL9A2-202ENST00000372748 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
COL9A2-202ENST00000372748 RBM10P98175 930 aaKnown RBP18.28■□□□□ 0.52
COL9A2-202ENST00000372748 CALD1Q05682 793 aaKnown RBP18.28■□□□□ 0.52
COL9A2-202ENST00000372748 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
COL9A2-202ENST00000372748 ZSCAN23Q3MJ62 389 aa18.27■□□□□ 0.52
COL9A2-202ENST00000372748 CLEC17AQ6ZS10 378 aa18.27■□□□□ 0.51
COL9A2-202ENST00000372748 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.51
COL9A2-202ENST00000372748 METP08581 1390 aa18.27■□□□□ 0.51
COL9A2-202ENST00000372748 APBB1O00213 710 aa18.26■□□□□ 0.51
COL9A2-202ENST00000372748 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
COL9A2-202ENST00000372748 RBSNQ9H1K0 784 aa18.26■□□□□ 0.51
COL9A2-202ENST00000372748 OFD1O75665 1012 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 GNAI1P63096 354 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
COL9A2-202ENST00000372748 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 COG3Q96JB2 828 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
COL9A2-202ENST00000372748 ATP7BP35670 1465 aa18.25■□□□□ 0.51
COL9A2-202ENST00000372748 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
COL9A2-202ENST00000372748 RABEP1Q15276 862 aa18.24■□□□□ 0.51
COL9A2-202ENST00000372748 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms