RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 WDR63Q8IWG1 891 aa23.67■■□□□ 1.38
CD40-202ENST00000372285 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
CD40-202ENST00000372285 HSP90AB2PQ58FF8 381 aa23.67■■□□□ 1.38
CD40-202ENST00000372285 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
CD40-202ENST00000372285 SPINK5Q9NQ38 1064 aaPredicted RBP23.66■■□□□ 1.38
CD40-202ENST00000372285 SLIT3O75094 1523 aa23.66■■□□□ 1.38
CD40-202ENST00000372285 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
CD40-202ENST00000372285 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.38
CD40-202ENST00000372285 HMOX1P09601 288 aa23.64■■□□□ 1.37
CD40-202ENST00000372285 AMPHP49418 695 aa23.64■■□□□ 1.37
CD40-202ENST00000372285 RTL1A6NKG5 1358 aa23.63■■□□□ 1.37
CD40-202ENST00000372285 XPCQ01831 940 aaPredicted RBP23.63■■□□□ 1.37
CD40-202ENST00000372285 NEFMP07197 916 aa23.62■■□□□ 1.37
CD40-202ENST00000372285 KCNH5Q8NCM2 988 aa23.62■■□□□ 1.37
CD40-202ENST00000372285 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
CD40-202ENST00000372285 USP19O94966 1318 aa23.61■■□□□ 1.37
CD40-202ENST00000372285 ARHGEF10O15013 1369 aa23.6■■□□□ 1.37
CD40-202ENST00000372285 DLG5Q8TDM6 1919 aa23.6■■□□□ 1.37
CD40-202ENST00000372285 HOXC9P31274 260 aa23.6■■□□□ 1.37
CD40-202ENST00000372285 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
CD40-202ENST00000372285 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
CD40-202ENST00000372285 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
CD40-202ENST00000372285 RIPK4P57078 832 aa23.59■■□□□ 1.37
CD40-202ENST00000372285 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
CD40-202ENST00000372285 PXDNQ92626 1479 aa23.58■■□□□ 1.37
CD40-202ENST00000372285 RRP1P56182 461 aaKnown RBP23.57■■□□□ 1.36
CD40-202ENST00000372285 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
CD40-202ENST00000372285 IL16Q14005 1332 aa23.56■■□□□ 1.36
CD40-202ENST00000372285 IGSF1Q8N6C5 1336 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 GCP02774 474 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 AEBP1Q8IUX7 1158 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 IP6K1Q92551 441 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 SLAIN2Q9P270 581 aa23.55■■□□□ 1.36
CD40-202ENST00000372285 KDRP35968 1356 aa23.54■■□□□ 1.36
CD40-202ENST00000372285 MED1Q15648 1581 aaPredicted RBP23.54■■□□□ 1.36
CD40-202ENST00000372285 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
CD40-202ENST00000372285 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
CD40-202ENST00000372285 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
CD40-202ENST00000372285 TNS3Q68CZ2 1445 aa23.53■■□□□ 1.36
CD40-202ENST00000372285 DDX17Q92841 729 aaKnown RBP23.53■■□□□ 1.36
CD40-202ENST00000372285 EYA1Q99502 592 aa23.52■■□□□ 1.36
CD40-202ENST00000372285 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
CD40-202ENST00000372285 CRYBG1Q9Y4K1 1723 aa23.51■■□□□ 1.35
CD40-202ENST00000372285 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
CD40-202ENST00000372285 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
CD40-202ENST00000372285 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
CD40-202ENST00000372285 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
CD40-202ENST00000372285 PPP4R2Q9NY27 417 aa23.46■■□□□ 1.35
CD40-202ENST00000372285 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
CD40-202ENST00000372285 RGPD2P0DJD1 1756 aa23.45■■□□□ 1.34
CD40-202ENST00000372285 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
CD40-202ENST00000372285 FANCIQ9NVI1 1328 aa23.45■■□□□ 1.34
CD40-202ENST00000372285 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
CD40-202ENST00000372285 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
CD40-202ENST00000372285 COL18A1P39060 1754 aa23.42■■□□□ 1.34
CD40-202ENST00000372285 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
CD40-202ENST00000372285 CAMTA1Q9Y6Y1 1673 aa23.42■■□□□ 1.34
CD40-202ENST00000372285 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
CD40-202ENST00000372285 ABCC6O95255 1503 aa23.41■■□□□ 1.34
CD40-202ENST00000372285 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.41■■□□□ 1.34
CD40-202ENST00000372285 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
CD40-202ENST00000372285 PLIN1O60240 522 aa23.4■■□□□ 1.34
CD40-202ENST00000372285 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
CD40-202ENST00000372285 PLEKHG5O94827 1062 aa23.39■■□□□ 1.34
CD40-202ENST00000372285 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
CD40-202ENST00000372285 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
CD40-202ENST00000372285 GNAI1P63096 354 aa23.38■■□□□ 1.33
CD40-202ENST00000372285 NBPF6Q5VWK0 638 aa23.38■■□□□ 1.33
CD40-202ENST00000372285 NBPF4Q96M43 638 aa23.38■■□□□ 1.33
CD40-202ENST00000372285 THUMPD2Q9BTF0 503 aaKnown RBP23.38■■□□□ 1.33
CD40-202ENST00000372285 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
CD40-202ENST00000372285 ZC3H6P61129 1189 aaKnown RBP23.37■■□□□ 1.33
CD40-202ENST00000372285 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
CD40-202ENST00000372285 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
CD40-202ENST00000372285 FAM83GA6ND36 823 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 BCAR3O75815 825 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 EXOSC9Q06265 439 aaKnown RBP23.36■■□□□ 1.33
CD40-202ENST00000372285 ABCA3Q99758 1704 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 CPDO75976 1380 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 ANKRD24Q8TF21 1146 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 AXIN2Q9Y2T1 843 aa23.36■■□□□ 1.33
CD40-202ENST00000372285 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
CD40-202ENST00000372285 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
CD40-202ENST00000372285 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
CD40-202ENST00000372285 FAM208AQ9UK61 1670 aaKnown RBP23.34■■□□□ 1.33
CD40-202ENST00000372285 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
CD40-202ENST00000372285 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.32
CD40-202ENST00000372285 DCTN1Q14203 1278 aa23.33■■□□□ 1.32
CD40-202ENST00000372285 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.32
CD40-202ENST00000372285 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.32
CD40-202ENST00000372285 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.32
CD40-202ENST00000372285 ERBB3P21860 1342 aa23.31■■□□□ 1.32
CD40-202ENST00000372285 LRRC37A3O60309 1634 aa23.31■■□□□ 1.32
CD40-202ENST00000372285 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
CD40-202ENST00000372285 C20orf194Q5TEA3 1177 aa23.3■■□□□ 1.32
CD40-202ENST00000372285 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
CD40-202ENST00000372285 CRB1P82279 1406 aa23.3■■□□□ 1.32
CD40-202ENST00000372285 MCM10Q7L590 875 aa23.3■■□□□ 1.32
CD40-202ENST00000372285 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms