RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 NEFMP07197 916 aa20.32■□□□□ 0.84
GTF3C5-204ENST00000372108 FOXO3O43524 673 aa20.31■□□□□ 0.84
GTF3C5-204ENST00000372108 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
GTF3C5-204ENST00000372108 FLT4P35916 1363 aa20.31■□□□□ 0.84
GTF3C5-204ENST00000372108 NFE2L2Q16236 605 aa20.3■□□□□ 0.84
GTF3C5-204ENST00000372108 MYH16Q9H6N6 1097 aa20.3■□□□□ 0.84
GTF3C5-204ENST00000372108 AMPHP49418 695 aa20.29■□□□□ 0.84
GTF3C5-204ENST00000372108 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
GTF3C5-204ENST00000372108 RGPD1P0DJD0 1748 aa20.29■□□□□ 0.84
GTF3C5-204ENST00000372108 ATF3P18847 181 aa20.29■□□□□ 0.84
GTF3C5-204ENST00000372108 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
GTF3C5-204ENST00000372108 DCCP43146 1447 aa20.28■□□□□ 0.84
GTF3C5-204ENST00000372108 SULT6B1Q6IMI4 303 aa20.28■□□□□ 0.84
GTF3C5-204ENST00000372108 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
GTF3C5-204ENST00000372108 IL16Q14005 1332 aa20.28■□□□□ 0.84
GTF3C5-204ENST00000372108 MST1RQ04912 1400 aa20.28■□□□□ 0.84
GTF3C5-204ENST00000372108 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
GTF3C5-204ENST00000372108 BCAR3O75815 825 aa20.27■□□□□ 0.84
GTF3C5-204ENST00000372108 KIF24Q5T7B8 1368 aa20.26■□□□□ 0.83
GTF3C5-204ENST00000372108 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
GTF3C5-204ENST00000372108 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
GTF3C5-204ENST00000372108 HOXC9P31274 260 aa20.25■□□□□ 0.83
GTF3C5-204ENST00000372108 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
GTF3C5-204ENST00000372108 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 NFAT5O94916 1531 aa20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
GTF3C5-204ENST00000372108 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
GTF3C5-204ENST00000372108 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
GTF3C5-204ENST00000372108 XIRP1Q702N8 1843 aaKnown RBP20.22■□□□□ 0.83
GTF3C5-204ENST00000372108 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
GTF3C5-204ENST00000372108 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
GTF3C5-204ENST00000372108 EYA1Q99502 592 aa20.21■□□□□ 0.83
GTF3C5-204ENST00000372108 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
GTF3C5-204ENST00000372108 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
GTF3C5-204ENST00000372108 MSH6P52701 1360 aa20.21■□□□□ 0.83
GTF3C5-204ENST00000372108 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 LTN1O94822 1766 aa20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
GTF3C5-204ENST00000372108 KDRP35968 1356 aa20.19■□□□□ 0.82
GTF3C5-204ENST00000372108 EXOSC9Q06265 439 aaKnown RBP20.19■□□□□ 0.82
GTF3C5-204ENST00000372108 IP6K1Q92551 441 aa20.18■□□□□ 0.82
GTF3C5-204ENST00000372108 LMOD3Q0VAK6 560 aa20.18■□□□□ 0.82
GTF3C5-204ENST00000372108 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
GTF3C5-204ENST00000372108 SLIT3O75094 1523 aa20.18■□□□□ 0.82
GTF3C5-204ENST00000372108 GCP02774 474 aa20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 USP19O94966 1318 aa20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
GTF3C5-204ENST00000372108 ALS2Q96Q42 1657 aa20.15■□□□□ 0.82
GTF3C5-204ENST00000372108 ZNF853P0CG23 659 aa20.15■□□□□ 0.82
GTF3C5-204ENST00000372108 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
GTF3C5-204ENST00000372108 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.82
GTF3C5-204ENST00000372108 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
GTF3C5-204ENST00000372108 LAS1LQ9Y4W2 734 aaKnown RBP20.14■□□□□ 0.81
GTF3C5-204ENST00000372108 DCTN1Q14203 1278 aa20.14■□□□□ 0.81
GTF3C5-204ENST00000372108 ARHGEF25Q86VW2 580 aa20.14■□□□□ 0.81
GTF3C5-204ENST00000372108 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
GTF3C5-204ENST00000372108 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
GTF3C5-204ENST00000372108 GNAI1P63096 354 aa20.12■□□□□ 0.81
GTF3C5-204ENST00000372108 NPHP3Q7Z494 1330 aa20.12■□□□□ 0.81
GTF3C5-204ENST00000372108 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
GTF3C5-204ENST00000372108 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
GTF3C5-204ENST00000372108 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
GTF3C5-204ENST00000372108 FRAT1Q92837 279 aaPredicted RBP20.11■□□□□ 0.81
GTF3C5-204ENST00000372108 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
GTF3C5-204ENST00000372108 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
GTF3C5-204ENST00000372108 MBIPQ9NS73 344 aa20.1■□□□□ 0.81
GTF3C5-204ENST00000372108 MED1Q15648 1581 aaPredicted RBP20.09■□□□□ 0.81
GTF3C5-204ENST00000372108 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
GTF3C5-204ENST00000372108 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
GTF3C5-204ENST00000372108 PXDNQ92626 1479 aa20.09■□□□□ 0.81
GTF3C5-204ENST00000372108 MCM10Q7L590 875 aa20.08■□□□□ 0.81
GTF3C5-204ENST00000372108 SSH1Q8WYL5 1049 aa20.08■□□□□ 0.81
GTF3C5-204ENST00000372108 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.8
GTF3C5-204ENST00000372108 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.8
GTF3C5-204ENST00000372108 PANK1Q8TE04 598 aa20.08■□□□□ 0.8
GTF3C5-204ENST00000372108 NBPF4Q96M43 638 aa20.08■□□□□ 0.8
GTF3C5-204ENST00000372108 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
GTF3C5-204ENST00000372108 SLAIN2Q9P270 581 aa20.07■□□□□ 0.8
GTF3C5-204ENST00000372108 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
GTF3C5-204ENST00000372108 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
GTF3C5-204ENST00000372108 TNNQ9UQP3 1299 aa20.06■□□□□ 0.8
GTF3C5-204ENST00000372108 VAMP4O75379 141 aa20.05■□□□□ 0.8
GTF3C5-204ENST00000372108 TSPYL6Q8N831 410 aa20.05■□□□□ 0.8
GTF3C5-204ENST00000372108 AXIN2Q9Y2T1 843 aa20.05■□□□□ 0.8
GTF3C5-204ENST00000372108 SPATA31A3Q5VYP0 1347 aa20.05■□□□□ 0.8
GTF3C5-204ENST00000372108 CRB1P82279 1406 aa20.05■□□□□ 0.8
GTF3C5-204ENST00000372108 RLBP1P12271 317 aa20.04■□□□□ 0.8
GTF3C5-204ENST00000372108 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
GTF3C5-204ENST00000372108 CHL1O00533 1208 aa20.03■□□□□ 0.8
GTF3C5-204ENST00000372108 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
GTF3C5-204ENST00000372108 ALDH1L2Q3SY69 923 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms