RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 DIP2BQ9P265 1576 aa23.94■■□□□ 1.42
GTF3C5-202ENST00000372097 PTPRMP28827 1452 aa23.93■■□□□ 1.42
GTF3C5-202ENST00000372097 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
GTF3C5-202ENST00000372097 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
GTF3C5-202ENST00000372097 MLECQ14165 292 aa23.92■■□□□ 1.42
GTF3C5-202ENST00000372097 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
GTF3C5-202ENST00000372097 FYB1O15117 783 aa23.91■■□□□ 1.42
GTF3C5-202ENST00000372097 SSFA2P28290 1259 aa23.91■■□□□ 1.42
GTF3C5-202ENST00000372097 GAS2L2Q8NHY3 880 aa23.91■■□□□ 1.42
GTF3C5-202ENST00000372097 PPP1R9BQ96SB3 815 aa23.91■■□□□ 1.42
GTF3C5-202ENST00000372097 DIAPH1O60610 1272 aaKnown RBP23.9■■□□□ 1.42
GTF3C5-202ENST00000372097 CCDC173Q0VFZ6 552 aa23.9■■□□□ 1.42
GTF3C5-202ENST00000372097 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.42
GTF3C5-202ENST00000372097 IBTKQ9P2D0 1353 aaPredicted RBP23.89■■□□□ 1.42
GTF3C5-202ENST00000372097 KLHL40Q2TBA0 621 aa23.89■■□□□ 1.41
GTF3C5-202ENST00000372097 CHMP4BQ9H444 224 aaKnown RBP23.88■■□□□ 1.41
GTF3C5-202ENST00000372097 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
GTF3C5-202ENST00000372097 SIRT2Q8IXJ6 389 aa23.88■■□□□ 1.41
GTF3C5-202ENST00000372097 ARHGAP45Q92619 1136 aa23.88■■□□□ 1.41
GTF3C5-202ENST00000372097 GOLGA6L22H0YM25 854 aa23.87■■□□□ 1.41
GTF3C5-202ENST00000372097 NASPP49321 788 aaPredicted RBP23.87■■□□□ 1.41
GTF3C5-202ENST00000372097 C1orf115Q9H7X2 142 aa23.87■■□□□ 1.41
GTF3C5-202ENST00000372097 ALKQ9UM73 1620 aa23.87■■□□□ 1.41
GTF3C5-202ENST00000372097 TPM2P07951 284 aa23.86■■□□□ 1.41
GTF3C5-202ENST00000372097 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
GTF3C5-202ENST00000372097 BAG4O95429 457 aaKnown RBP23.86■■□□□ 1.41
GTF3C5-202ENST00000372097 TERF2IPQ9NYB0 399 aa23.86■■□□□ 1.41
GTF3C5-202ENST00000372097 FCHSD2O94868 740 aa23.85■■□□□ 1.41
GTF3C5-202ENST00000372097 MRPL50Q8N5N7 158 aaKnown RBP23.85■■□□□ 1.41
GTF3C5-202ENST00000372097 VAMP4O75379 141 aa23.85■■□□□ 1.41
GTF3C5-202ENST00000372097 CDK19Q9BWU1 502 aa23.85■■□□□ 1.41
GTF3C5-202ENST00000372097 CLTCQ00610 1675 aaKnown RBP23.84■■□□□ 1.41
GTF3C5-202ENST00000372097 VSIG10Q8N0Z9 540 aa23.84■■□□□ 1.41
GTF3C5-202ENST00000372097 DDX49Q9Y6V7 483 aaKnown RBP23.84■■□□□ 1.41
GTF3C5-202ENST00000372097 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
GTF3C5-202ENST00000372097 CDC45O75419 566 aa23.83■■□□□ 1.41
GTF3C5-202ENST00000372097 ZSCAN30Q86W11 494 aa23.83■■□□□ 1.41
GTF3C5-202ENST00000372097 CD163L1Q9NR16 1453 aa23.82■■□□□ 1.4
GTF3C5-202ENST00000372097 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
GTF3C5-202ENST00000372097 WAPLQ7Z5K2 1190 aa23.82■■□□□ 1.4
GTF3C5-202ENST00000372097 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
GTF3C5-202ENST00000372097 ANKRD26Q9UPS8 1709 aa23.81■■□□□ 1.4
GTF3C5-202ENST00000372097 ABCC4O15439 1325 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 ZMYND15Q9H091 742 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 GSPT1P15170 499 aaKnown RBP23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 PRKAR2BP31323 418 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 PKNOX2Q96KN3 472 aa23.8■■□□□ 1.4
GTF3C5-202ENST00000372097 AGLP35573 1532 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 FAM135BQ49AJ0 1406 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 A2ML1A8K2U0 1454 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 ZNF445P59923 1031 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 HDGFL2Q7Z4V5 671 aaPredicted RBP23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 TSPYL6Q8N831 410 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 ANP32BQ92688 251 aaKnown RBP23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 CDC42BPGQ6DT37 1551 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 RABEP1Q15276 862 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 KIAA1211Q6ZU35 1233 aa23.79■■□□□ 1.4
GTF3C5-202ENST00000372097 ARHGEF40Q8TER5 1519 aa23.77■■□□□ 1.4
GTF3C5-202ENST00000372097 OFD1O75665 1012 aa23.77■■□□□ 1.4
GTF3C5-202ENST00000372097 CYP2E1P05181 493 aaPredicted RBP23.77■■□□□ 1.4
GTF3C5-202ENST00000372097 RIMS2Q9UQ26 1411 aa23.77■■□□□ 1.4
GTF3C5-202ENST00000372097 PLEKHM2Q8IWE5 1019 aa23.76■■□□□ 1.39
GTF3C5-202ENST00000372097 NUCB2P80303 420 aa23.76■■□□□ 1.39
GTF3C5-202ENST00000372097 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
GTF3C5-202ENST00000372097 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
GTF3C5-202ENST00000372097 NFE2L2Q16236 605 aa23.75■■□□□ 1.39
GTF3C5-202ENST00000372097 MCTP1Q6DN14 999 aa23.74■■□□□ 1.39
GTF3C5-202ENST00000372097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.74■■□□□ 1.39
GTF3C5-202ENST00000372097 LMBRD1Q9NUN5 540 aa23.74■■□□□ 1.39
GTF3C5-202ENST00000372097 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
GTF3C5-202ENST00000372097 ZNF853P0CG23 659 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 CALD1Q05682 793 aaKnown RBP23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 PDCL3Q9H2J4 239 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 IFT57Q9NWB7 429 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 GNAI1P63096 354 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 ZSCAN23Q3MJ62 389 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 USP26Q9BXU7 913 aa23.73■■□□□ 1.39
GTF3C5-202ENST00000372097 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 FBLN1P23142 703 aa23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 MSNP26038 577 aaKnown RBP23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 HS1BP3Q53T59 392 aa23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 CAVIN1Q6NZI2 390 aaKnown RBP23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
GTF3C5-202ENST00000372097 DCTPP1Q9H773 170 aa23.71■■□□□ 1.39
GTF3C5-202ENST00000372097 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
GTF3C5-202ENST00000372097 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
GTF3C5-202ENST00000372097 TERF1P54274 439 aa23.7■■□□□ 1.38
GTF3C5-202ENST00000372097 PKP1Q13835 747 aa23.7■■□□□ 1.38
GTF3C5-202ENST00000372097 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
GTF3C5-202ENST00000372097 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.7■■□□□ 1.38
GTF3C5-202ENST00000372097 TWISTNBQ3B726 338 aaPredicted RBP23.69■■□□□ 1.38
GTF3C5-202ENST00000372097 PDLIM2Q96JY6 352 aa23.69■■□□□ 1.38
GTF3C5-202ENST00000372097 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
GTF3C5-202ENST00000372097 HMOX1P09601 288 aa23.69■■□□□ 1.38
GTF3C5-202ENST00000372097 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
GTF3C5-202ENST00000372097 CWC22Q9HCG8 908 aaKnown RBP23.68■■□□□ 1.38
GTF3C5-202ENST00000372097 NCLP19338 710 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms