RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NFAT5O94916 1531 aa34.52■■■■□ 3.12
ATPAF1-202ENST00000371937 HMOX1P09601 288 aa34.52■■■■□ 3.12
ATPAF1-202ENST00000371937 USP19O94966 1318 aa34.51■■■■□ 3.11
ATPAF1-202ENST00000371937 TMPOP42166 694 aaKnown RBP34.51■■■■□ 3.11
ATPAF1-202ENST00000371937 SLFN5Q08AF3 891 aa34.51■■■■□ 3.11
ATPAF1-202ENST00000371937 SLIT3O75094 1523 aa34.5■■■■□ 3.11
ATPAF1-202ENST00000371937 ALS2Q96Q42 1657 aa34.5■■■■□ 3.11
ATPAF1-202ENST00000371937 HOXC9P31274 260 aa34.5■■■■□ 3.11
ATPAF1-202ENST00000371937 E9PSI1 815 aa34.49■■■■□ 3.11
ATPAF1-202ENST00000371937 GCP02774 474 aa34.48■■■■□ 3.11
ATPAF1-202ENST00000371937 WDR63Q8IWG1 891 aa34.48■■■■□ 3.11
ATPAF1-202ENST00000371937 DDX17Q92841 729 aaKnown RBP34.48■■■■□ 3.11
ATPAF1-202ENST00000371937 PXDNQ92626 1479 aa34.48■■■■□ 3.11
ATPAF1-202ENST00000371937 DUSP27Q5VZP5 1158 aa34.46■■■■□ 3.11
ATPAF1-202ENST00000371937 TRMT2AQ8IZ69 625 aaKnown RBP34.46■■■■□ 3.11
ATPAF1-202ENST00000371937 LTN1O94822 1766 aa34.45■■■■□ 3.11
ATPAF1-202ENST00000371937 TNS3Q68CZ2 1445 aa34.45■■■■□ 3.11
ATPAF1-202ENST00000371937 ARHGEF10O15013 1369 aa34.44■■■■□ 3.1
ATPAF1-202ENST00000371937 RGPD1P0DJD0 1748 aa34.44■■■■□ 3.1
ATPAF1-202ENST00000371937 IP6K1Q92551 441 aa34.44■■■■□ 3.1
ATPAF1-202ENST00000371937 FKBP8Q14318 412 aa34.44■■■■□ 3.1
ATPAF1-202ENST00000371937 SULT6B1Q6IMI4 303 aa34.43■■■■□ 3.1
ATPAF1-202ENST00000371937 RIPK4P57078 832 aa34.42■■■■□ 3.1
ATPAF1-202ENST00000371937 PHRF1Q9P1Y6 1649 aaKnown RBP34.42■■■■□ 3.1
ATPAF1-202ENST00000371937 RCAN3Q9UKA8 241 aa34.41■■■■□ 3.1
ATPAF1-202ENST00000371937 SPATA31A3Q5VYP0 1347 aa34.41■■■■□ 3.1
ATPAF1-202ENST00000371937 PHACTR3Q96KR7 559 aa34.4■■■■□ 3.1
ATPAF1-202ENST00000371937 NFE2L2Q16236 605 aa34.39■■■■□ 3.1
ATPAF1-202ENST00000371937 ARHGEF25Q86VW2 580 aa34.39■■■■□ 3.1
ATPAF1-202ENST00000371937 SPINK5Q9NQ38 1064 aaPredicted RBP34.39■■■■□ 3.1
ATPAF1-202ENST00000371937 LTBP4Q8N2S1 1624 aa34.39■■■■□ 3.1
ATPAF1-202ENST00000371937 RNF123Q5XPI4 1314 aa34.38■■■■□ 3.09
ATPAF1-202ENST00000371937 IGSF1Q8N6C5 1336 aa34.37■■■■□ 3.09
ATPAF1-202ENST00000371937 TRIM35Q9UPQ4 493 aa34.37■■■■□ 3.09
ATPAF1-202ENST00000371937 SOS2Q07890 1332 aaPredicted RBP34.37■■■■□ 3.09
ATPAF1-202ENST00000371937 AEBP1Q8IUX7 1158 aa34.37■■■■□ 3.09
ATPAF1-202ENST00000371937 EYA1Q99502 592 aa34.36■■■■□ 3.09
ATPAF1-202ENST00000371937 KDRP35968 1356 aa34.35■■■■□ 3.09
ATPAF1-202ENST00000371937 MED1Q15648 1581 aaPredicted RBP34.35■■■■□ 3.09
ATPAF1-202ENST00000371937 PLEKHG5O94827 1062 aa34.33■■■■□ 3.09
ATPAF1-202ENST00000371937 ZBTB7CA1YPR0 619 aa34.32■■■■□ 3.09
ATPAF1-202ENST00000371937 MYH16Q9H6N6 1097 aa34.32■■■■□ 3.08
ATPAF1-202ENST00000371937 IL16Q14005 1332 aa34.31■■■■□ 3.08
ATPAF1-202ENST00000371937 LMOD3Q0VAK6 560 aa34.3■■■■□ 3.08
ATPAF1-202ENST00000371937 LTV1Q96GA3 475 aaPredicted RBP34.3■■■■□ 3.08
ATPAF1-202ENST00000371937 ERICH6BQ5W0A0 696 aa34.27■■■■□ 3.08
ATPAF1-202ENST00000371937 NHSL1Q5SYE7 1610 aa34.27■■■■□ 3.08
ATPAF1-202ENST00000371937 CALD1Q05682 793 aaKnown RBP34.26■■■■□ 3.08
ATPAF1-202ENST00000371937 ZC3H6P61129 1189 aaKnown RBP34.25■■■■□ 3.07
ATPAF1-202ENST00000371937 RRP1P56182 461 aaKnown RBP34.23■■■■□ 3.07
ATPAF1-202ENST00000371937 IRX6P78412 446 aaPredicted RBP34.23■■■■□ 3.07
ATPAF1-202ENST00000371937 CABLES1Q8TDN4 633 aa34.22■■■■□ 3.07
ATPAF1-202ENST00000371937 CRYBG1Q9Y4K1 1723 aa34.22■■■■□ 3.07
ATPAF1-202ENST00000371937 DLG5Q8TDM6 1919 aa34.19■■■■□ 3.06
ATPAF1-202ENST00000371937 ANKRD24Q8TF21 1146 aa34.18■■■■□ 3.06
ATPAF1-202ENST00000371937 CPDO75976 1380 aa34.18■■■■□ 3.06
ATPAF1-202ENST00000371937 ABCC6O95255 1503 aa34.18■■■■□ 3.06
ATPAF1-202ENST00000371937 NBPF6Q5VWK0 638 aa34.17■■■■□ 3.06
ATPAF1-202ENST00000371937 NBPF4Q96M43 638 aa34.17■■■■□ 3.06
ATPAF1-202ENST00000371937 AXIN2Q9Y2T1 843 aa34.17■■■■□ 3.06
ATPAF1-202ENST00000371937 GAS2L2Q8NHY3 880 aa34.16■■■■□ 3.06
ATPAF1-202ENST00000371937 FANCIQ9NVI1 1328 aa34.15■■■■□ 3.06
ATPAF1-202ENST00000371937 ROBO1Q9Y6N7 1651 aa34.15■■■■□ 3.06
ATPAF1-202ENST00000371937 MTHFSDQ2M296 383 aaKnown RBP34.14■■■■□ 3.06
ATPAF1-202ENST00000371937 AEBP2Q6ZN18 517 aaPredicted RBP34.13■■■■□ 3.05
ATPAF1-202ENST00000371937 CT47B1P0C2W7 299 aaPredicted RBP34.12■■■■□ 3.05
ATPAF1-202ENST00000371937 ERBB3P21860 1342 aa34.12■■■■□ 3.05
ATPAF1-202ENST00000371937 USHBP1Q8N6Y0 703 aa34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 KIAA0232Q92628 1395 aa34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 GNAI1P63096 354 aa34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 TSR2Q969E8 191 aaKnown RBP34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 LRRC59Q96AG4 307 aaKnown RBP34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 IFT57Q9NWB7 429 aa34.11■■■■□ 3.05
ATPAF1-202ENST00000371937 NCAPD2Q15021 1401 aa34.1■■■■□ 3.05
ATPAF1-202ENST00000371937 COL18A1P39060 1754 aa34.09■■■■□ 3.05
ATPAF1-202ENST00000371937 HAP1P54257 671 aaPredicted RBP34.09■■■■□ 3.05
ATPAF1-202ENST00000371937 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.09■■■■□ 3.05
ATPAF1-202ENST00000371937 THUMPD2Q9BTF0 503 aaKnown RBP34.09■■■■□ 3.05
ATPAF1-202ENST00000371937 AHDC1Q5TGY3 1603 aaPredicted RBP34.09■■■■□ 3.05
ATPAF1-202ENST00000371937 RGPD5Q99666 1765 aa34.08■■■■□ 3.05
ATPAF1-202ENST00000371937 FAM83GA6ND36 823 aa34.08■■■■□ 3.05
ATPAF1-202ENST00000371937 RTF1Q92541 710 aaKnown RBP34.07■■■■□ 3.04
ATPAF1-202ENST00000371937 HTATSF1O43719 755 aaKnown RBP34.07■■■■□ 3.04
ATPAF1-202ENST00000371937 RGPD2P0DJD1 1756 aa34.06■■■■□ 3.04
ATPAF1-202ENST00000371937 TOM1O60784 492 aa34.06■■■■□ 3.04
ATPAF1-202ENST00000371937 CFAP44Q96MT7 982 aa34.06■■■■□ 3.04
ATPAF1-202ENST00000371937 CAMTA1Q9Y6Y1 1673 aa34.06■■■■□ 3.04
ATPAF1-202ENST00000371937 ZNF853P0CG23 659 aa34.05■■■■□ 3.04
ATPAF1-202ENST00000371937 LAS1LQ9Y4W2 734 aaKnown RBP34.05■■■■□ 3.04
ATPAF1-202ENST00000371937 CHRNA2Q15822 529 aa34.04■■■■□ 3.04
ATPAF1-202ENST00000371937 EXOSC9Q06265 439 aaKnown RBP34.04■■■■□ 3.04
ATPAF1-202ENST00000371937 DCTN1Q14203 1278 aa34.04■■■■□ 3.04
ATPAF1-202ENST00000371937 PRDM11Q9NQV5 511 aa34.04■■■■□ 3.04
ATPAF1-202ENST00000371937 ABCA3Q99758 1704 aa34.02■■■■□ 3.04
ATPAF1-202ENST00000371937 GNAT3A8MTJ3 354 aa34.01■■■■□ 3.03
ATPAF1-202ENST00000371937 MCM10Q7L590 875 aa34.01■■■■□ 3.03
ATPAF1-202ENST00000371937 PPP4R2Q9NY27 417 aa34.01■■■■□ 3.03
ATPAF1-202ENST00000371937 PLIN1O60240 522 aa34■■■■□ 3.03
ATPAF1-202ENST00000371937 RARSP54136 660 aaKnown RBP34■■■■□ 3.03
ATPAF1-202ENST00000371937 FAM208AQ9UK61 1670 aaKnown RBP34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms