RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
GTF2B-201ENST00000370500 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
GTF2B-201ENST00000370500 PMFBP1Q8TBY8 1022 aa13.44□□□□□ -0.26
GTF2B-201ENST00000370500 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
GTF2B-201ENST00000370500 NGDNQ8NEJ9 315 aaKnown RBP13.43□□□□□ -0.26
GTF2B-201ENST00000370500 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
GTF2B-201ENST00000370500 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
GTF2B-201ENST00000370500 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 G3V3G9 751 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
GTF2B-201ENST00000370500 AFF2P51816 1311 aa13.41□□□□□ -0.26
GTF2B-201ENST00000370500 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
GTF2B-201ENST00000370500 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
GTF2B-201ENST00000370500 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
GTF2B-201ENST00000370500 FNBP4Q8N3X1 1017 aaPredicted RBP13.41□□□□□ -0.26
GTF2B-201ENST00000370500 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
GTF2B-201ENST00000370500 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
GTF2B-201ENST00000370500 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
GTF2B-201ENST00000370500 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
GTF2B-201ENST00000370500 RGPD8O14715 1765 aaPredicted RBP13.39□□□□□ -0.27
GTF2B-201ENST00000370500 ATP7BP35670 1465 aa13.39□□□□□ -0.27
GTF2B-201ENST00000370500 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
GTF2B-201ENST00000370500 RXRBP28702 533 aa13.39□□□□□ -0.27
GTF2B-201ENST00000370500 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
GTF2B-201ENST00000370500 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
GTF2B-201ENST00000370500 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
GTF2B-201ENST00000370500 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
GTF2B-201ENST00000370500 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
GTF2B-201ENST00000370500 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
GTF2B-201ENST00000370500 USP21Q9UK80 565 aa13.37□□□□□ -0.27
GTF2B-201ENST00000370500 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
GTF2B-201ENST00000370500 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
GTF2B-201ENST00000370500 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
GTF2B-201ENST00000370500 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
GTF2B-201ENST00000370500 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
GTF2B-201ENST00000370500 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
GTF2B-201ENST00000370500 ACEP12821 1306 aa13.36□□□□□ -0.27
GTF2B-201ENST00000370500 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
GTF2B-201ENST00000370500 EMP3P54852 163 aa13.35□□□□□ -0.27
GTF2B-201ENST00000370500 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
GTF2B-201ENST00000370500 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.27
GTF2B-201ENST00000370500 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.27
GTF2B-201ENST00000370500 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
GTF2B-201ENST00000370500 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
GTF2B-201ENST00000370500 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
GTF2B-201ENST00000370500 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
GTF2B-201ENST00000370500 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
GTF2B-201ENST00000370500 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
GTF2B-201ENST00000370500 CABP1Q9NZU7 370 aa13.32□□□□□ -0.28
GTF2B-201ENST00000370500 TOPAZ1Q8N9V7 1692 aa13.31□□□□□ -0.28
GTF2B-201ENST00000370500 BCL9LQ86UU0 1499 aa13.31□□□□□ -0.28
GTF2B-201ENST00000370500 SLIT2O94813 1529 aa13.3□□□□□ -0.28
GTF2B-201ENST00000370500 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
GTF2B-201ENST00000370500 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
GTF2B-201ENST00000370500 ATRNO75882 1429 aa13.29□□□□□ -0.28
GTF2B-201ENST00000370500 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
GTF2B-201ENST00000370500 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
GTF2B-201ENST00000370500 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
GTF2B-201ENST00000370500 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
GTF2B-201ENST00000370500 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
GTF2B-201ENST00000370500 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
GTF2B-201ENST00000370500 VPS72Q15906 364 aa13.27□□□□□ -0.29
GTF2B-201ENST00000370500 USP6P35125 1406 aa13.27□□□□□ -0.29
GTF2B-201ENST00000370500 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
GTF2B-201ENST00000370500 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
GTF2B-201ENST00000370500 TESK2Q96S53 571 aa13.25□□□□□ -0.29
GTF2B-201ENST00000370500 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
GTF2B-201ENST00000370500 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
GTF2B-201ENST00000370500 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
GTF2B-201ENST00000370500 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
GTF2B-201ENST00000370500 USP19O94966 1318 aa13.24□□□□□ -0.29
GTF2B-201ENST00000370500 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
GTF2B-201ENST00000370500 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
GTF2B-201ENST00000370500 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
GTF2B-201ENST00000370500 NLRP6P59044 892 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
GTF2B-201ENST00000370500 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
GTF2B-201ENST00000370500 RGS12O14924 1447 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 CPDO75976 1380 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 USP47Q96K76 1375 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 GCP02774 474 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 EFCAB3Q8N7B9 438 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
GTF2B-201ENST00000370500 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
GTF2B-201ENST00000370500 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
GTF2B-201ENST00000370500 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
GTF2B-201ENST00000370500 TMF1P82094 1093 aa13.21□□□□□ -0.29
GTF2B-201ENST00000370500 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
GTF2B-201ENST00000370500 TMC1Q8TDI8 760 aa13.21□□□□□ -0.29
GTF2B-201ENST00000370500 ZC3H6P61129 1189 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms