RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.11
LINC01561-201ENST00000369071 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
LINC01561-201ENST00000369071 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC01561-201ENST00000369071 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
LINC01561-201ENST00000369071 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
LINC01561-201ENST00000369071 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 TBC1D9Q6ZT07 1266 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 GBP4Q96PP9 640 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 CABP1Q9NZU7 370 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 C1orf115Q9H7X2 142 aa15.69■□□□□ 0.1
LINC01561-201ENST00000369071 ABCC4O15439 1325 aa15.68■□□□□ 0.1
LINC01561-201ENST00000369071 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
LINC01561-201ENST00000369071 REREQ9P2R6 1566 aa15.68■□□□□ 0.1
LINC01561-201ENST00000369071 NEO1Q92859 1461 aa15.68■□□□□ 0.1
LINC01561-201ENST00000369071 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
LINC01561-201ENST00000369071 SKOR2Q2VWA4 1001 aaPredicted RBP15.68■□□□□ 0.1
LINC01561-201ENST00000369071 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
LINC01561-201ENST00000369071 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
LINC01561-201ENST00000369071 GAS2L3Q86XJ1 694 aa15.67■□□□□ 0.1
LINC01561-201ENST00000369071 THUMPD2Q9BTF0 503 aaKnown RBP15.67■□□□□ 0.1
LINC01561-201ENST00000369071 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
LINC01561-201ENST00000369071 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
LINC01561-201ENST00000369071 PTMSP20962 102 aa15.66■□□□□ 0.1
LINC01561-201ENST00000369071 FBLN1P23142 703 aa15.66■□□□□ 0.1
LINC01561-201ENST00000369071 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
LINC01561-201ENST00000369071 GNAI1P63096 354 aa15.66■□□□□ 0.1
LINC01561-201ENST00000369071 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
LINC01561-201ENST00000369071 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
LINC01561-201ENST00000369071 HMOX1P09601 288 aa15.65■□□□□ 0.1
LINC01561-201ENST00000369071 ATP7BP35670 1465 aa15.64■□□□□ 0.09
LINC01561-201ENST00000369071 CLEC17AQ6ZS10 378 aa15.64■□□□□ 0.09
LINC01561-201ENST00000369071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC01561-201ENST00000369071 CDC45O75419 566 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 ESPNB1AK53 854 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
LINC01561-201ENST00000369071 IL13P35225 146 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
LINC01561-201ENST00000369071 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
LINC01561-201ENST00000369071 GSPT1P15170 499 aaKnown RBP15.62■□□□□ 0.09
LINC01561-201ENST00000369071 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
LINC01561-201ENST00000369071 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
LINC01561-201ENST00000369071 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
LINC01561-201ENST00000369071 SSFA2P28290 1259 aa15.62■□□□□ 0.09
LINC01561-201ENST00000369071 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
LINC01561-201ENST00000369071 NAP1L5Q96NT1 182 aaPredicted RBP15.62■□□□□ 0.09
LINC01561-201ENST00000369071 RICTORQ6R327 1708 aa15.62■□□□□ 0.09
LINC01561-201ENST00000369071 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
LINC01561-201ENST00000369071 API5Q9BZZ5 524 aaKnown RBP15.61■□□□□ 0.09
LINC01561-201ENST00000369071 DLC1Q96QB1 1528 aa15.61■□□□□ 0.09
LINC01561-201ENST00000369071 PLEKHM2Q8IWE5 1019 aa15.6■□□□□ 0.09
LINC01561-201ENST00000369071 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
LINC01561-201ENST00000369071 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
LINC01561-201ENST00000369071 EMILIN1Q9Y6C2 1016 aa15.6■□□□□ 0.09
LINC01561-201ENST00000369071 CDK12Q9NYV4 1490 aaPredicted RBP15.6■□□□□ 0.09
LINC01561-201ENST00000369071 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
LINC01561-201ENST00000369071 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.09
LINC01561-201ENST00000369071 DLG5Q8TDM6 1919 aa15.58■□□□□ 0.08
LINC01561-201ENST00000369071 IBTKQ9P2D0 1353 aaPredicted RBP15.58■□□□□ 0.08
LINC01561-201ENST00000369071 BAG4O95429 457 aaKnown RBP15.58■□□□□ 0.08
LINC01561-201ENST00000369071 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
LINC01561-201ENST00000369071 RABEP1Q15276 862 aa15.58■□□□□ 0.08
LINC01561-201ENST00000369071 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
LINC01561-201ENST00000369071 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
LINC01561-201ENST00000369071 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
LINC01561-201ENST00000369071 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
LINC01561-201ENST00000369071 KLHL40Q2TBA0 621 aa15.57■□□□□ 0.08
LINC01561-201ENST00000369071 TTC22Q5TAA0 569 aa15.57■□□□□ 0.08
LINC01561-201ENST00000369071 WAPLQ7Z5K2 1190 aa15.57■□□□□ 0.08
LINC01561-201ENST00000369071 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
LINC01561-201ENST00000369071 TRIM44Q96DX7 344 aaPredicted RBP15.56■□□□□ 0.08
LINC01561-201ENST00000369071 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
LINC01561-201ENST00000369071 USP26Q9BXU7 913 aa15.56■□□□□ 0.08
LINC01561-201ENST00000369071 NME9Q86XW9 330 aa15.55■□□□□ 0.08
LINC01561-201ENST00000369071 PPP1R9BQ96SB3 815 aa15.55■□□□□ 0.08
LINC01561-201ENST00000369071 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
LINC01561-201ENST00000369071 CYP2E1P05181 493 aaPredicted RBP15.55■□□□□ 0.08
LINC01561-201ENST00000369071 ATP10DQ9P241 1426 aa15.55■□□□□ 0.08
LINC01561-201ENST00000369071 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
LINC01561-201ENST00000369071 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
LINC01561-201ENST00000369071 CCDC173Q0VFZ6 552 aa15.54■□□□□ 0.08
LINC01561-201ENST00000369071 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
LINC01561-201ENST00000369071 ANKRD44Q8N8A2 993 aa15.54■□□□□ 0.08
LINC01561-201ENST00000369071 RGS12O14924 1447 aa15.54■□□□□ 0.08
LINC01561-201ENST00000369071 DDX49Q9Y6V7 483 aaKnown RBP15.53■□□□□ 0.08
LINC01561-201ENST00000369071 NASPP49321 788 aaPredicted RBP15.52■□□□□ 0.08
LINC01561-201ENST00000369071 NUCB2P80303 420 aa15.52■□□□□ 0.08
LINC01561-201ENST00000369071 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
LINC01561-201ENST00000369071 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.07
LINC01561-201ENST00000369071 CPS1P31327 1500 aa15.51■□□□□ 0.07
LINC01561-201ENST00000369071 WASLO00401 505 aaPredicted RBP15.51■□□□□ 0.07
LINC01561-201ENST00000369071 ZNF445P59923 1031 aa15.51■□□□□ 0.07
LINC01561-201ENST00000369071 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
LINC01561-201ENST00000369071 OTUD7AQ8TE49 926 aaPredicted RBP15.51■□□□□ 0.07
LINC01561-201ENST00000369071 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms