RNA–Protein interactions for RNA: ENST00000368849.7

TUFT1-203, Transcript of tuftelin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUFT1, Length 3,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-203ENST00000368849 NME9Q86XW9 330 aa12.97□□□□□ -0.33
TUFT1-203ENST00000368849 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
TUFT1-203ENST00000368849 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
TUFT1-203ENST00000368849 MST1RQ04912 1400 aa12.97□□□□□ -0.33
TUFT1-203ENST00000368849 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
TUFT1-203ENST00000368849 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
TUFT1-203ENST00000368849 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
TUFT1-203ENST00000368849 MTHFSP49914 203 aa12.95□□□□□ -0.34
TUFT1-203ENST00000368849 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
TUFT1-203ENST00000368849 COG3Q96JB2 828 aa12.95□□□□□ -0.34
TUFT1-203ENST00000368849 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
TUFT1-203ENST00000368849 TRPM3Q9HCF6 1732 aaPredicted RBP12.95□□□□□ -0.34
TUFT1-203ENST00000368849 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
TUFT1-203ENST00000368849 MSH6P52701 1360 aa12.94□□□□□ -0.34
TUFT1-203ENST00000368849 DDRGK1Q96HY6 314 aa12.94□□□□□ -0.34
TUFT1-203ENST00000368849 CFAP53Q96M91 514 aa12.94□□□□□ -0.34
TUFT1-203ENST00000368849 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
TUFT1-203ENST00000368849 MS4A1P11836 297 aa12.93□□□□□ -0.34
TUFT1-203ENST00000368849 ATF3P18847 181 aa12.93□□□□□ -0.34
TUFT1-203ENST00000368849 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
TUFT1-203ENST00000368849 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
TUFT1-203ENST00000368849 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
TUFT1-203ENST00000368849 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
TUFT1-203ENST00000368849 CENPQQ7L2Z9 268 aaPredicted RBP12.92□□□□□ -0.34
TUFT1-203ENST00000368849 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
TUFT1-203ENST00000368849 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
TUFT1-203ENST00000368849 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
TUFT1-203ENST00000368849 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
TUFT1-203ENST00000368849 PEAK1Q9H792 1746 aa12.89□□□□□ -0.35
TUFT1-203ENST00000368849 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
TUFT1-203ENST00000368849 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
TUFT1-203ENST00000368849 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
TUFT1-203ENST00000368849 PSME1Q06323 249 aa12.88□□□□□ -0.35
TUFT1-203ENST00000368849 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
TUFT1-203ENST00000368849 RLBP1P12271 317 aa12.87□□□□□ -0.35
TUFT1-203ENST00000368849 SLIT3O75094 1523 aa12.87□□□□□ -0.35
TUFT1-203ENST00000368849 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
TUFT1-203ENST00000368849 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 FBLN1P23142 703 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
TUFT1-203ENST00000368849 NFAT5O94916 1531 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 FOXO3O43524 673 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
TUFT1-203ENST00000368849 NLRP6P59044 892 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
TUFT1-203ENST00000368849 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
TUFT1-203ENST00000368849 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
TUFT1-203ENST00000368849 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
TUFT1-203ENST00000368849 PXDNQ92626 1479 aa12.85□□□□□ -0.35
TUFT1-203ENST00000368849 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
TUFT1-203ENST00000368849 USP35Q9P2H5 1018 aa12.84□□□□□ -0.35
TUFT1-203ENST00000368849 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
TUFT1-203ENST00000368849 LTN1O94822 1766 aa12.84□□□□□ -0.35
TUFT1-203ENST00000368849 RRS1Q15050 365 aaKnown RBP12.84□□□□□ -0.35
TUFT1-203ENST00000368849 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
TUFT1-203ENST00000368849 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.35
TUFT1-203ENST00000368849 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.35
TUFT1-203ENST00000368849 IL13P35225 146 aa12.83□□□□□ -0.36
TUFT1-203ENST00000368849 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
TUFT1-203ENST00000368849 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
TUFT1-203ENST00000368849 USP19O94966 1318 aa12.83□□□□□ -0.36
TUFT1-203ENST00000368849 CRYBG1Q9Y4K1 1723 aa12.83□□□□□ -0.36
TUFT1-203ENST00000368849 BRINP3Q76B58 766 aa12.82□□□□□ -0.36
TUFT1-203ENST00000368849 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
TUFT1-203ENST00000368849 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
TUFT1-203ENST00000368849 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
TUFT1-203ENST00000368849 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.36
TUFT1-203ENST00000368849 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
TUFT1-203ENST00000368849 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 FLT4P35916 1363 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
TUFT1-203ENST00000368849 PHF23Q9BUL5 403 aaPredicted RBP12.81□□□□□ -0.36
TUFT1-203ENST00000368849 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
TUFT1-203ENST00000368849 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
TUFT1-203ENST00000368849 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
TUFT1-203ENST00000368849 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
TUFT1-203ENST00000368849 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
TUFT1-203ENST00000368849 FCHSD2O94868 740 aa12.79□□□□□ -0.36
TUFT1-203ENST00000368849 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
TUFT1-203ENST00000368849 PANK2Q9BZ23 570 aa12.79□□□□□ -0.36
TUFT1-203ENST00000368849 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
TUFT1-203ENST00000368849 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
TUFT1-203ENST00000368849 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
TUFT1-203ENST00000368849 E9PSI1 815 aa12.78□□□□□ -0.36
TUFT1-203ENST00000368849 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
TUFT1-203ENST00000368849 ARHGEF10O15013 1369 aa12.77□□□□□ -0.36
TUFT1-203ENST00000368849 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
TUFT1-203ENST00000368849 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
TUFT1-203ENST00000368849 HOXC9P31274 260 aa12.77□□□□□ -0.37
TUFT1-203ENST00000368849 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
TUFT1-203ENST00000368849 DDX17Q92841 729 aaKnown RBP12.77□□□□□ -0.37
TUFT1-203ENST00000368849 AMPHP49418 695 aa12.76□□□□□ -0.37
TUFT1-203ENST00000368849 ABCC6O95255 1503 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms