RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CCT4P50991 539 aaKnown RBP21.33■■□□□ 1
SNX27-203ENST00000368843 LRRCC1Q9C099 1032 aa21.33■■□□□ 1
SNX27-203ENST00000368843 MYO6Q9UM54 1294 aa21.32■■□□□ 1
SNX27-203ENST00000368843 TRIM5Q9C035 493 aa21.32■■□□□ 1
SNX27-203ENST00000368843 PDCL3Q9H2J4 239 aa21.32■■□□□ 1
SNX27-203ENST00000368843 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
SNX27-203ENST00000368843 MATR3P43243 847 aaKnown RBP eCLIP21.31■■□□□ 12e-6■□□□□ 11.3
SNX27-203ENST00000368843 TRIM22Q8IYM9 498 aa21.31■■□□□ 1
SNX27-203ENST00000368843 CCDC85AQ96PX6 553 aaPredicted RBP21.31■■□□□ 1
SNX27-203ENST00000368843 KIF21BO75037 1637 aa21.31■■□□□ 1
SNX27-203ENST00000368843 ZSCAN25Q6NSZ9 544 aa21.3■■□□□ 1
SNX27-203ENST00000368843 SPC24Q8NBT2 197 aa21.3■■□□□ 1
SNX27-203ENST00000368843 NBPF1Q3BBV0 1214 aa21.3■■□□□ 1
SNX27-203ENST00000368843 RAI14Q9P0K7 980 aa21.3■■□□□ 1
SNX27-203ENST00000368843 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
SNX27-203ENST00000368843 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
SNX27-203ENST00000368843 TDO2P48775 406 aa21.3■■□□□ 1
SNX27-203ENST00000368843 AACSQ86V21 672 aa21.3■■□□□ 1
SNX27-203ENST00000368843 LETM1O95202 739 aaPredicted RBP21.3■■□□□ 1
SNX27-203ENST00000368843 ZC3H6P61129 1189 aaKnown RBP21.3■■□□□ 1
SNX27-203ENST00000368843 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
SNX27-203ENST00000368843 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
SNX27-203ENST00000368843 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
SNX27-203ENST00000368843 ERBINQ96RT1 1412 aa21.29■■□□□ 1
SNX27-203ENST00000368843 HSP90B2PQ58FF3 399 aa21.29■■□□□ 1
SNX27-203ENST00000368843 CAVIN1Q6NZI2 390 aaKnown RBP21.29■■□□□ 1
SNX27-203ENST00000368843 CYP46A1Q9Y6A2 500 aa21.29■■□□□ 1
SNX27-203ENST00000368843 FIBPO43427 364 aa21.29■■□□□ 1
SNX27-203ENST00000368843 GCC1Q96CN9 775 aa21.29■■□□□ 1
SNX27-203ENST00000368843 PDCP20941 246 aa21.28■■□□□ 1
SNX27-203ENST00000368843 PLCD4Q9BRC7 762 aa21.28■■□□□ 1
SNX27-203ENST00000368843 RAPGEF3O95398 923 aa21.28■■□□□ 1
SNX27-203ENST00000368843 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.27■■□□□ 1
SNX27-203ENST00000368843 NASPP49321 788 aaPredicted RBP21.27■■□□□ 1
SNX27-203ENST00000368843 CCDC39Q9UFE4 941 aa21.27■■□□□ 1
SNX27-203ENST00000368843 POGZQ7Z3K3 1410 aa21.27■■□□□ 1
SNX27-203ENST00000368843 CFTRP13569 1480 aa21.27■■□□□ 1
SNX27-203ENST00000368843 ZNF76P36508 570 aa21.26■□□□□ 0.99
SNX27-203ENST00000368843 IGHMBP2P38935 993 aaKnown RBP21.26■□□□□ 0.99
SNX27-203ENST00000368843 MAP7D2Q96T17 732 aa21.26■□□□□ 0.99
SNX27-203ENST00000368843 PRPF40AO75400 957 aaKnown RBP21.26■□□□□ 0.99
SNX27-203ENST00000368843 LRP2BPQ9P2M1 347 aa21.26■□□□□ 0.99
SNX27-203ENST00000368843 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
SNX27-203ENST00000368843 TSPY26PQ9H489 355 aa21.25■□□□□ 0.99
SNX27-203ENST00000368843 BCAR3O75815 825 aa21.25■□□□□ 0.99
SNX27-203ENST00000368843 USP5P45974 858 aa21.25■□□□□ 0.99
SNX27-203ENST00000368843 MCM2P49736 904 aa21.24■□□□□ 0.99
SNX27-203ENST00000368843 FAM43AQ8N2R8 423 aa21.24■□□□□ 0.99
SNX27-203ENST00000368843 SSBP05455 408 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNX27-203ENST00000368843 STIM1Q13586 685 aa21.24■□□□□ 0.99
SNX27-203ENST00000368843 ANKRD1Q15327 319 aa21.24■□□□□ 0.99
SNX27-203ENST00000368843 SERPINC1P01008 464 aa21.24■□□□□ 0.99
SNX27-203ENST00000368843 JMYQ8N9B5 988 aa21.23■□□□□ 0.99
SNX27-203ENST00000368843 UBAC1Q9BSL1 405 aa21.23■□□□□ 0.99
SNX27-203ENST00000368843 ZNHIT6Q9NWK9 470 aaKnown RBP21.23■□□□□ 0.99
SNX27-203ENST00000368843 PLEKHH2Q8IVE3 1493 aa21.23■□□□□ 0.99
SNX27-203ENST00000368843 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
SNX27-203ENST00000368843 DEF6Q9H4E7 631 aa21.23■□□□□ 0.99
SNX27-203ENST00000368843 ME1P48163 572 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 SRGAP3O43295 1099 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 STARD3NLO95772 234 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 SEPT11Q9NVA2 429 aaKnown RBP21.22■□□□□ 0.99
SNX27-203ENST00000368843 NOL7Q9UMY1 257 aaKnown RBP21.22■□□□□ 0.99
SNX27-203ENST00000368843 CALRP27797 417 aaKnown RBP21.22■□□□□ 0.99
SNX27-203ENST00000368843 RABEP1Q15276 862 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 ZPR1O75312 459 aa21.22■□□□□ 0.99
SNX27-203ENST00000368843 NEFHP12036 1026 aa21.21■□□□□ 0.99
SNX27-203ENST00000368843 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
SNX27-203ENST00000368843 TMOD2Q9NZR1 351 aa21.21■□□□□ 0.99
SNX27-203ENST00000368843 CHMP4BP1P59074 171 aa21.21■□□□□ 0.99
SNX27-203ENST00000368843 CEP126Q9P2H0 1117 aa21.21■□□□□ 0.99
SNX27-203ENST00000368843 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
SNX27-203ENST00000368843 IDH1O75874 414 aaKnown RBP21.2■□□□□ 0.98
SNX27-203ENST00000368843 CWC27Q6UX04 472 aaKnown RBP21.2■□□□□ 0.98
SNX27-203ENST00000368843 EHBP1L1Q8N3D4 1523 aa21.2■□□□□ 0.98
SNX27-203ENST00000368843 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
SNX27-203ENST00000368843 NFKBIBQ15653 356 aa21.2■□□□□ 0.98
SNX27-203ENST00000368843 ERCC4Q92889 916 aaPredicted RBP21.19■□□□□ 0.98
SNX27-203ENST00000368843 ABCF2Q9UG63 623 aa21.19■□□□□ 0.98
SNX27-203ENST00000368843 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
SNX27-203ENST00000368843 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
SNX27-203ENST00000368843 ADAMTS2O95450 1211 aa21.19■□□□□ 0.98
SNX27-203ENST00000368843 AEBP1Q8IUX7 1158 aa21.19■□□□□ 0.98
SNX27-203ENST00000368843 TMOD3Q9NYL9 352 aa21.19■□□□□ 0.98
SNX27-203ENST00000368843 HFM1A2PYH4 1435 aa21.18■□□□□ 0.98
SNX27-203ENST00000368843 DACH1Q9UI36 760 aa21.18■□□□□ 0.98
SNX27-203ENST00000368843 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
SNX27-203ENST00000368843 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
SNX27-203ENST00000368843 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
SNX27-203ENST00000368843 METTL24Q5JXM2 366 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 PPFIBP1Q86W92 1011 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 PTCD1O75127 700 aaKnown RBP21.17■□□□□ 0.98
SNX27-203ENST00000368843 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 TRAK2O60296 914 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 ANKRD62A6NC57 917 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 ANKIB1Q9P2G1 1089 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 TNMDQ9H2S6 317 aa21.17■□□□□ 0.98
SNX27-203ENST00000368843 CCP110O43303 1012 aa21.16■□□□□ 0.98
SNX27-203ENST00000368843 MBD3O95983 291 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms