RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
SHC1-202ENST00000368445 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
SHC1-202ENST00000368445 ATP7BP35670 1465 aa17.54■□□□□ 0.4
SHC1-202ENST00000368445 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
SHC1-202ENST00000368445 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
SHC1-202ENST00000368445 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
SHC1-202ENST00000368445 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
SHC1-202ENST00000368445 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
SHC1-202ENST00000368445 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
SHC1-202ENST00000368445 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
SHC1-202ENST00000368445 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
SHC1-202ENST00000368445 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
SHC1-202ENST00000368445 NECTIN2Q92692 538 aa17.52■□□□□ 0.39
SHC1-202ENST00000368445 FOXO3O43524 673 aa17.51■□□□□ 0.39
SHC1-202ENST00000368445 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
SHC1-202ENST00000368445 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
SHC1-202ENST00000368445 MAP3K19Q56UN5 1328 aa17.51■□□□□ 0.39
SHC1-202ENST00000368445 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
SHC1-202ENST00000368445 IL16Q14005 1332 aa17.5■□□□□ 0.39
SHC1-202ENST00000368445 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
SHC1-202ENST00000368445 USHBP1Q8N6Y0 703 aa17.49■□□□□ 0.39
SHC1-202ENST00000368445 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
SHC1-202ENST00000368445 CPS1P31327 1500 aa17.49■□□□□ 0.39
SHC1-202ENST00000368445 APBB1O00213 710 aa17.49■□□□□ 0.39
SHC1-202ENST00000368445 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
SHC1-202ENST00000368445 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 VAMP4O75379 141 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 PHF8Q9UPP1 1060 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
SHC1-202ENST00000368445 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
SHC1-202ENST00000368445 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
SHC1-202ENST00000368445 PROSER2Q86WR7 435 aaPredicted RBP17.45■□□□□ 0.38
SHC1-202ENST00000368445 MED14O60244 1454 aa17.45■□□□□ 0.38
SHC1-202ENST00000368445 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
SHC1-202ENST00000368445 USP32Q8NFA0 1604 aa17.45■□□□□ 0.38
SHC1-202ENST00000368445 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
SHC1-202ENST00000368445 EYA1Q99502 592 aa17.44■□□□□ 0.38
SHC1-202ENST00000368445 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
SHC1-202ENST00000368445 USP6P35125 1406 aa17.44■□□□□ 0.38
SHC1-202ENST00000368445 AATKQ6ZMQ8 1374 aa17.43■□□□□ 0.38
SHC1-202ENST00000368445 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
SHC1-202ENST00000368445 MTHFSDQ2M296 383 aaKnown RBP17.43■□□□□ 0.38
SHC1-202ENST00000368445 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SHC1-202ENST00000368445 AAMPQ13685 434 aa17.42■□□□□ 0.38
SHC1-202ENST00000368445 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
SHC1-202ENST00000368445 TTC21AQ8NDW8 1320 aa17.42■□□□□ 0.38
SHC1-202ENST00000368445 TECPR2O15040 1411 aa17.42■□□□□ 0.38
SHC1-202ENST00000368445 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
SHC1-202ENST00000368445 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
SHC1-202ENST00000368445 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
SHC1-202ENST00000368445 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
SHC1-202ENST00000368445 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
SHC1-202ENST00000368445 SEC24BO95487 1268 aa17.4■□□□□ 0.38
SHC1-202ENST00000368445 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
SHC1-202ENST00000368445 API5Q9BZZ5 524 aaKnown RBP17.4■□□□□ 0.38
SHC1-202ENST00000368445 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
SHC1-202ENST00000368445 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
SHC1-202ENST00000368445 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
SHC1-202ENST00000368445 HAP1P54257 671 aaPredicted RBP17.38■□□□□ 0.37
SHC1-202ENST00000368445 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
SHC1-202ENST00000368445 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
SHC1-202ENST00000368445 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
SHC1-202ENST00000368445 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
SHC1-202ENST00000368445 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
SHC1-202ENST00000368445 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
SHC1-202ENST00000368445 FLT4P35916 1363 aa17.37■□□□□ 0.37
SHC1-202ENST00000368445 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
SHC1-202ENST00000368445 HOXC9P31274 260 aa17.37■□□□□ 0.37
SHC1-202ENST00000368445 F6X3S4 739 aa17.35■□□□□ 0.37
SHC1-202ENST00000368445 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
SHC1-202ENST00000368445 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
SHC1-202ENST00000368445 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
SHC1-202ENST00000368445 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
SHC1-202ENST00000368445 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
SHC1-202ENST00000368445 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
SHC1-202ENST00000368445 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.37
SHC1-202ENST00000368445 SETD1BQ9UPS6 1966 aaKnown RBP17.33■□□□□ 0.36
SHC1-202ENST00000368445 CHL1O00533 1208 aa17.33■□□□□ 0.36
SHC1-202ENST00000368445 HSPA2P54652 639 aa17.33■□□□□ 0.36
SHC1-202ENST00000368445 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
SHC1-202ENST00000368445 ATF3P18847 181 aa17.32■□□□□ 0.36
SHC1-202ENST00000368445 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
SHC1-202ENST00000368445 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
SHC1-202ENST00000368445 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
SHC1-202ENST00000368445 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
SHC1-202ENST00000368445 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
SHC1-202ENST00000368445 BECN1Q14457 450 aa17.31■□□□□ 0.36
SHC1-202ENST00000368445 TEFQ10587 303 aa17.3■□□□□ 0.36
SHC1-202ENST00000368445 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
SHC1-202ENST00000368445 C3P01024 1663 aa17.3■□□□□ 0.36
SHC1-202ENST00000368445 G2E3Q7L622 706 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 FER1L4A9Z1Z3 1794 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms