RNA–Protein interactions for RNA: ENST00000368358.3

HCN3-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN3, Length 3,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-201ENST00000368358 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
HCN3-201ENST00000368358 PDE4AP27815 886 aa17.07■□□□□ 0.32
HCN3-201ENST00000368358 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
HCN3-201ENST00000368358 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
HCN3-201ENST00000368358 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
HCN3-201ENST00000368358 SLIT1O75093 1534 aa17.06■□□□□ 0.32
HCN3-201ENST00000368358 MSH5O43196 834 aa17.06■□□□□ 0.32
HCN3-201ENST00000368358 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
HCN3-201ENST00000368358 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
HCN3-201ENST00000368358 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
HCN3-201ENST00000368358 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
HCN3-201ENST00000368358 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
HCN3-201ENST00000368358 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
HCN3-201ENST00000368358 EYA1Q99502 592 aa17.05■□□□□ 0.32
HCN3-201ENST00000368358 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
HCN3-201ENST00000368358 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
HCN3-201ENST00000368358 GCP02774 474 aa17.04■□□□□ 0.32
HCN3-201ENST00000368358 MSH6P52701 1360 aa17.03■□□□□ 0.32
HCN3-201ENST00000368358 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
HCN3-201ENST00000368358 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
HCN3-201ENST00000368358 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
HCN3-201ENST00000368358 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
HCN3-201ENST00000368358 HOXC9P31274 260 aa17.02■□□□□ 0.32
HCN3-201ENST00000368358 KRT24Q2M2I5 525 aa17.02■□□□□ 0.31
HCN3-201ENST00000368358 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.31
HCN3-201ENST00000368358 STRN4Q9NRL3 753 aa17.02■□□□□ 0.31
HCN3-201ENST00000368358 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
HCN3-201ENST00000368358 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
HCN3-201ENST00000368358 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
HCN3-201ENST00000368358 GNAI1P63096 354 aa17■□□□□ 0.31
HCN3-201ENST00000368358 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
HCN3-201ENST00000368358 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
HCN3-201ENST00000368358 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
HCN3-201ENST00000368358 FLT4P35916 1363 aa16.99■□□□□ 0.31
HCN3-201ENST00000368358 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
HCN3-201ENST00000368358 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
HCN3-201ENST00000368358 DIP2AQ14689 1571 aa16.99■□□□□ 0.31
HCN3-201ENST00000368358 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
HCN3-201ENST00000368358 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
HCN3-201ENST00000368358 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
HCN3-201ENST00000368358 MED14O60244 1454 aa16.98■□□□□ 0.31
HCN3-201ENST00000368358 RLBP1P12271 317 aa16.98■□□□□ 0.31
HCN3-201ENST00000368358 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
HCN3-201ENST00000368358 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
HCN3-201ENST00000368358 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
HCN3-201ENST00000368358 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
HCN3-201ENST00000368358 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
HCN3-201ENST00000368358 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
HCN3-201ENST00000368358 TEFQ10587 303 aa16.97■□□□□ 0.31
HCN3-201ENST00000368358 EVA1CP58658 441 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
HCN3-201ENST00000368358 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
HCN3-201ENST00000368358 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 IGHDP01880 384 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
HCN3-201ENST00000368358 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
HCN3-201ENST00000368358 INSRP06213 1382 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 MPRIPQ6WCQ1 1025 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 GAS2L2Q8NHY3 880 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
HCN3-201ENST00000368358 PDE3AQ14432 1141 aa16.94■□□□□ 0.3
HCN3-201ENST00000368358 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
HCN3-201ENST00000368358 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
HCN3-201ENST00000368358 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
HCN3-201ENST00000368358 APBB1O00213 710 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
HCN3-201ENST00000368358 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 ARXQ96QS3 562 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
HCN3-201ENST00000368358 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
HCN3-201ENST00000368358 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
HCN3-201ENST00000368358 MYT1Q01538 1121 aa16.92■□□□□ 0.3
HCN3-201ENST00000368358 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
HCN3-201ENST00000368358 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
HCN3-201ENST00000368358 IP6K1Q92551 441 aa16.92■□□□□ 0.3
HCN3-201ENST00000368358 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
HCN3-201ENST00000368358 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
HCN3-201ENST00000368358 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
HCN3-201ENST00000368358 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
HCN3-201ENST00000368358 SETD1AO15047 1707 aaKnown RBP16.9■□□□□ 0.3
HCN3-201ENST00000368358 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
HCN3-201ENST00000368358 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
HCN3-201ENST00000368358 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
HCN3-201ENST00000368358 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
HCN3-201ENST00000368358 ADAMTS2O95450 1211 aa16.9■□□□□ 0.3
HCN3-201ENST00000368358 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
HCN3-201ENST00000368358 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
HCN3-201ENST00000368358 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
HCN3-201ENST00000368358 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
HCN3-201ENST00000368358 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
HCN3-201ENST00000368358 TRIM27P14373 513 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms