RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
NCSTN-202ENST00000368063 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
NCSTN-202ENST00000368063 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
NCSTN-202ENST00000368063 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
NCSTN-202ENST00000368063 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
NCSTN-202ENST00000368063 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
NCSTN-202ENST00000368063 TRIM34Q9BYJ4 488 aa15.98■□□□□ 0.15
NCSTN-202ENST00000368063 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
NCSTN-202ENST00000368063 TRIM27P14373 513 aa15.98■□□□□ 0.15
NCSTN-202ENST00000368063 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
NCSTN-202ENST00000368063 FAM184AQ8NB25 1140 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 ADCY5O95622 1261 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.97■□□□□ 0.15
NCSTN-202ENST00000368063 NEUROD2Q15784 382 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
NCSTN-202ENST00000368063 TSPYL1Q9H0U9 437 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 PYCARDQ9ULZ3 195 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 ANKRD36BQ8N2N9 1353 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 REREQ9P2R6 1566 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 KIF18AQ8NI77 898 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
NCSTN-202ENST00000368063 CLTCL1P53675 1640 aa15.96■□□□□ 0.14
NCSTN-202ENST00000368063 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
NCSTN-202ENST00000368063 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
NCSTN-202ENST00000368063 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
NCSTN-202ENST00000368063 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
NCSTN-202ENST00000368063 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
NCSTN-202ENST00000368063 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
NCSTN-202ENST00000368063 SYAP1Q96A49 352 aaPredicted RBP15.94■□□□□ 0.14
NCSTN-202ENST00000368063 KRT222Q8N1A0 295 aa15.93■□□□□ 0.14
NCSTN-202ENST00000368063 FAM53CQ9NYF3 392 aa15.93■□□□□ 0.14
NCSTN-202ENST00000368063 FEZ2Q9UHY8 353 aaPredicted RBP15.93■□□□□ 0.14
NCSTN-202ENST00000368063 CEP152O94986 1710 aa15.93■□□□□ 0.14
NCSTN-202ENST00000368063 ARHGAP5Q13017 1502 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 CDC45O75419 566 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 FAM193AP78312 1265 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
NCSTN-202ENST00000368063 ARAP3Q8WWN8 1544 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 PHF14O94880 888 aa15.92■□□□□ 0.14
NCSTN-202ENST00000368063 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
NCSTN-202ENST00000368063 TMEM57Q8N5G2 664 aa15.91■□□□□ 0.14
NCSTN-202ENST00000368063 SMC4Q9NTJ3 1288 aa15.91■□□□□ 0.14
NCSTN-202ENST00000368063 YY1AP1Q9H869 796 aa15.9■□□□□ 0.14
NCSTN-202ENST00000368063 CREBRFQ8IUR6 639 aa15.9■□□□□ 0.14
NCSTN-202ENST00000368063 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
NCSTN-202ENST00000368063 NOS1P29475 1434 aa15.89■□□□□ 0.13
NCSTN-202ENST00000368063 SMTNL1A8MU46 457 aa15.89■□□□□ 0.13
NCSTN-202ENST00000368063 PLCH2O75038 1416 aa15.89■□□□□ 0.13
NCSTN-202ENST00000368063 NAA30Q147X3 362 aaPredicted RBP15.89■□□□□ 0.13
NCSTN-202ENST00000368063 KDM4AO75164 1064 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 MMP14P50281 582 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 USP26Q9BXU7 913 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
NCSTN-202ENST00000368063 SYCP2Q9BX26 1530 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 BRD1O95696 1058 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.13
NCSTN-202ENST00000368063 UNC13BO14795 1591 aa15.88■□□□□ 0.13
NCSTN-202ENST00000368063 TPM3P06753 285 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 ANKRD45Q5TZF3 282 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
NCSTN-202ENST00000368063 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
NCSTN-202ENST00000368063 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 EFCC1Q9HA90 598 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
NCSTN-202ENST00000368063 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 MADDQ8WXG6 1647 aa15.87■□□□□ 0.13
NCSTN-202ENST00000368063 ZBTB9Q96C00 473 aa15.86■□□□□ 0.13
NCSTN-202ENST00000368063 ST18O60284 1047 aa15.86■□□□□ 0.13
NCSTN-202ENST00000368063 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 GSPT1P15170 499 aaKnown RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 GEMIN8Q9NWZ8 242 aaKnown RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 AP5Z1O43299 807 aa15.86■□□□□ 0.13
NCSTN-202ENST00000368063 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 CYP2C19P33261 490 aa15.86■□□□□ 0.13
NCSTN-202ENST00000368063 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 GCC1Q96CN9 775 aa15.86■□□□□ 0.13
NCSTN-202ENST00000368063 NOB1Q9ULX3 412 aaKnown RBP15.86■□□□□ 0.13
NCSTN-202ENST00000368063 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 SOX12O15370 315 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 TRERF1Q96PN7 1200 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 MED14O60244 1454 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 HNRNPH2P55795 449 aaKnown RBP15.85■□□□□ 0.13
NCSTN-202ENST00000368063 RAD51AP2Q09MP3 1159 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 KMT5BQ4FZB7 885 aa15.85■□□□□ 0.13
NCSTN-202ENST00000368063 ZNF397Q8NF99 534 aaPredicted RBP15.84■□□□□ 0.13
NCSTN-202ENST00000368063 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
NCSTN-202ENST00000368063 BRD2P25440 801 aaKnown RBP15.84■□□□□ 0.13
NCSTN-202ENST00000368063 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
NCSTN-202ENST00000368063 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
NCSTN-202ENST00000368063 ST7Q9NRC1 585 aa15.84■□□□□ 0.13
NCSTN-202ENST00000368063 EXOSC9Q06265 439 aaKnown RBP15.83■□□□□ 0.12
NCSTN-202ENST00000368063 CCDC183Q5T5S1 534 aa15.83■□□□□ 0.12
NCSTN-202ENST00000368063 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms