RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 PRR20EP86478 221 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 PRR20CP86479 221 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 PRR20DP86480 221 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 PRR20BP86481 221 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 PRR20AP86496 221 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 SLFNL1Q499Z3 407 aa8.65□□□□□ -1.02
CNIH4-201ENST00000366856 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
CNIH4-201ENST00000366856 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
CNIH4-201ENST00000366856 SOX11P35716 441 aa8.64□□□□□ -1.03
CNIH4-201ENST00000366856 NNTQ13423 1086 aa8.64□□□□□ -1.03
CNIH4-201ENST00000366856 TOR4AQ9NXH8 423 aa8.64□□□□□ -1.03
CNIH4-201ENST00000366856 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
CNIH4-201ENST00000366856 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
CNIH4-201ENST00000366856 CEP126Q9P2H0 1117 aa8.63□□□□□ -1.03
CNIH4-201ENST00000366856 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
CNIH4-201ENST00000366856 SMPD1P17405 629 aa8.62□□□□□ -1.03
CNIH4-201ENST00000366856 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
CNIH4-201ENST00000366856 RNF135Q8IUD6 432 aa8.62□□□□□ -1.03
CNIH4-201ENST00000366856 CDK15Q96Q40 435 aa8.62□□□□□ -1.03
CNIH4-201ENST00000366856 NR3C2P08235 984 aa8.61□□□□□ -1.03
CNIH4-201ENST00000366856 GRM5P41594 1212 aa8.61□□□□□ -1.03
CNIH4-201ENST00000366856 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
CNIH4-201ENST00000366856 CCDC116Q8IYX3 515 aa8.61□□□□□ -1.03
CNIH4-201ENST00000366856 ALG2Q9H553 416 aa8.61□□□□□ -1.03
CNIH4-201ENST00000366856 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
CNIH4-201ENST00000366856 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
CNIH4-201ENST00000366856 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
CNIH4-201ENST00000366856 NR5A1Q13285 461 aa8.6□□□□□ -1.03
CNIH4-201ENST00000366856 HPS1Q92902 700 aa8.6□□□□□ -1.03
CNIH4-201ENST00000366856 SKIP12755 728 aa8.59□□□□□ -1.03
CNIH4-201ENST00000366856 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
CNIH4-201ENST00000366856 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
CNIH4-201ENST00000366856 ARID3AQ99856 593 aa8.59□□□□□ -1.03
CNIH4-201ENST00000366856 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
CNIH4-201ENST00000366856 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
CNIH4-201ENST00000366856 DHX9Q08211 1270 aaKnown RBP8.58□□□□□ -1.04
CNIH4-201ENST00000366856 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
CNIH4-201ENST00000366856 PPP1R26Q5T8A7 1209 aaPredicted RBP8.58□□□□□ -1.04
CNIH4-201ENST00000366856 MPNDQ8N594 471 aa8.58□□□□□ -1.04
CNIH4-201ENST00000366856 CCDC97Q96F63 343 aaPredicted RBP8.58□□□□□ -1.04
CNIH4-201ENST00000366856 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
CNIH4-201ENST00000366856 CYLDQ9NQC7 956 aa8.58□□□□□ -1.04
CNIH4-201ENST00000366856 DOLKQ9UPQ8 538 aa8.58□□□□□ -1.04
CNIH4-201ENST00000366856 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
CNIH4-201ENST00000366856 ESPNB1AK53 854 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 LAPTM4AQ15012 233 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 Q6ZNB5 142 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
CNIH4-201ENST00000366856 UCN2Q96RP3 112 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
CNIH4-201ENST00000366856 TSGA10IPQ3SY00 556 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 PLPP7Q8NBV4 271 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
CNIH4-201ENST00000366856 ITPKCQ96DU7 683 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 EMILIN1Q9Y6C2 1016 aa8.55□□□□□ -1.04
CNIH4-201ENST00000366856 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
CNIH4-201ENST00000366856 RFX1P22670 979 aa8.54□□□□□ -1.04
CNIH4-201ENST00000366856 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
CNIH4-201ENST00000366856 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
CNIH4-201ENST00000366856 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
CNIH4-201ENST00000366856 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
CNIH4-201ENST00000366856 DGAT1O75907 488 aa8.53□□□□□ -1.04
CNIH4-201ENST00000366856 PALM3A6NDB9 673 aaPredicted RBP8.52□□□□□ -1.05
CNIH4-201ENST00000366856 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.05
CNIH4-201ENST00000366856 TIMP2P16035 220 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 SCTRP47872 440 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 MYT1Q01538 1121 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 CBLBQ13191 982 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 ARXQ96QS3 562 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.05
CNIH4-201ENST00000366856 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 ATP9BO43861 1147 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
CNIH4-201ENST00000366856 NCOA4Q13772 614 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 PHTF2Q8N3S3 785 aa8.51□□□□□ -1.05
CNIH4-201ENST00000366856 AXIN1O15169 862 aa8.5□□□□□ -1.05
CNIH4-201ENST00000366856 BMP1P13497 986 aa8.5□□□□□ -1.05
CNIH4-201ENST00000366856 PSME1Q06323 249 aa8.5□□□□□ -1.05
CNIH4-201ENST00000366856 EML3Q32P44 896 aa8.5□□□□□ -1.05
CNIH4-201ENST00000366856 SERPINA10Q9UK55 444 aa8.5□□□□□ -1.05
CNIH4-201ENST00000366856 RELBQ01201 579 aa8.49□□□□□ -1.05
CNIH4-201ENST00000366856 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
CNIH4-201ENST00000366856 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
CNIH4-201ENST00000366856 AGBL1Q96MI9 1066 aa8.49□□□□□ -1.05
CNIH4-201ENST00000366856 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
CNIH4-201ENST00000366856 UPP2O95045 317 aa8.48□□□□□ -1.05
CNIH4-201ENST00000366856 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
CNIH4-201ENST00000366856 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
CNIH4-201ENST00000366856 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
CNIH4-201ENST00000366856 NFATC2IPQ8NCF5 419 aa8.48□□□□□ -1.05
CNIH4-201ENST00000366856 TRIM52Q96A61 297 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms