RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
H3F3A-203ENST00000366815 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
H3F3A-203ENST00000366815 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
H3F3A-203ENST00000366815 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
H3F3A-203ENST00000366815 PRR36Q9H6K5 1346 aa16.15■□□□□ 0.18
H3F3A-203ENST00000366815 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
H3F3A-203ENST00000366815 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
H3F3A-203ENST00000366815 USP21Q9UK80 565 aa16.14■□□□□ 0.17
H3F3A-203ENST00000366815 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
H3F3A-203ENST00000366815 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
H3F3A-203ENST00000366815 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
H3F3A-203ENST00000366815 ATRNO75882 1429 aa16.13■□□□□ 0.17
H3F3A-203ENST00000366815 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
H3F3A-203ENST00000366815 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
H3F3A-203ENST00000366815 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
H3F3A-203ENST00000366815 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
H3F3A-203ENST00000366815 PSME1Q06323 249 aa16.12■□□□□ 0.17
H3F3A-203ENST00000366815 ATP7BP35670 1465 aa16.11■□□□□ 0.17
H3F3A-203ENST00000366815 ST18O60284 1047 aa16.11■□□□□ 0.17
H3F3A-203ENST00000366815 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
H3F3A-203ENST00000366815 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
H3F3A-203ENST00000366815 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
H3F3A-203ENST00000366815 SLIT2O94813 1529 aa16.1■□□□□ 0.17
H3F3A-203ENST00000366815 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
H3F3A-203ENST00000366815 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
H3F3A-203ENST00000366815 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
H3F3A-203ENST00000366815 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.17
H3F3A-203ENST00000366815 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.17
H3F3A-203ENST00000366815 SNPHO15079 494 aa16.07■□□□□ 0.16
H3F3A-203ENST00000366815 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
H3F3A-203ENST00000366815 NWD2Q9ULI1 1742 aa16.07■□□□□ 0.16
H3F3A-203ENST00000366815 TRPM1Q7Z4N2 1603 aa16.06■□□□□ 0.16
H3F3A-203ENST00000366815 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
H3F3A-203ENST00000366815 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
H3F3A-203ENST00000366815 GLI3P10071 1580 aa16.05■□□□□ 0.16
H3F3A-203ENST00000366815 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
H3F3A-203ENST00000366815 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
H3F3A-203ENST00000366815 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
H3F3A-203ENST00000366815 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
H3F3A-203ENST00000366815 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
H3F3A-203ENST00000366815 GJD4Q96KN9 370 aaPredicted RBP16.03■□□□□ 0.16
H3F3A-203ENST00000366815 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
H3F3A-203ENST00000366815 RALGAPBQ86X10 1494 aa16.03■□□□□ 0.16
H3F3A-203ENST00000366815 NRAPQ86VF7 1730 aa16.02■□□□□ 0.16
H3F3A-203ENST00000366815 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
H3F3A-203ENST00000366815 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
H3F3A-203ENST00000366815 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
H3F3A-203ENST00000366815 G3V3G9 751 aa16.01■□□□□ 0.15
H3F3A-203ENST00000366815 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
H3F3A-203ENST00000366815 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
H3F3A-203ENST00000366815 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
H3F3A-203ENST00000366815 CENPJQ9HC77 1338 aaPredicted RBP16■□□□□ 0.15
H3F3A-203ENST00000366815 CDAN1Q8IWY9 1227 aa16■□□□□ 0.15
H3F3A-203ENST00000366815 PHRF1Q9P1Y6 1649 aaKnown RBP15.99■□□□□ 0.15
H3F3A-203ENST00000366815 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
H3F3A-203ENST00000366815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
H3F3A-203ENST00000366815 PLEKHG3A1L390 1219 aa15.98■□□□□ 0.15
H3F3A-203ENST00000366815 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
H3F3A-203ENST00000366815 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
H3F3A-203ENST00000366815 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
H3F3A-203ENST00000366815 ACEP12821 1306 aa15.97■□□□□ 0.15
H3F3A-203ENST00000366815 VPS72Q15906 364 aa15.97■□□□□ 0.15
H3F3A-203ENST00000366815 EP400Q96L91 3159 aa15.96■□□□□ 0.15
H3F3A-203ENST00000366815 TMEM121BQ9BXQ6 578 aaPredicted RBP15.96■□□□□ 0.15
H3F3A-203ENST00000366815 PPIP5K1Q6PFW1 1433 aa15.95■□□□□ 0.14
H3F3A-203ENST00000366815 STK25O00506 426 aa15.95■□□□□ 0.14
H3F3A-203ENST00000366815 NBPF8Q3BBV2 869 aa15.95■□□□□ 0.14
H3F3A-203ENST00000366815 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
H3F3A-203ENST00000366815 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
H3F3A-203ENST00000366815 ONECUT3O60422 494 aaPredicted RBP15.93■□□□□ 0.14
H3F3A-203ENST00000366815 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
H3F3A-203ENST00000366815 EFCAB3Q8N7B9 438 aa15.93■□□□□ 0.14
H3F3A-203ENST00000366815 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
H3F3A-203ENST00000366815 BOLA1Q9Y3E2 137 aa15.93■□□□□ 0.14
H3F3A-203ENST00000366815 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
H3F3A-203ENST00000366815 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
H3F3A-203ENST00000366815 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
H3F3A-203ENST00000366815 SEPT12Q8IYM1 358 aa15.9■□□□□ 0.14
H3F3A-203ENST00000366815 PRDM11Q9NQV5 511 aa15.9■□□□□ 0.14
H3F3A-203ENST00000366815 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
H3F3A-203ENST00000366815 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
H3F3A-203ENST00000366815 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
H3F3A-203ENST00000366815 USP19O94966 1318 aa15.89■□□□□ 0.13
H3F3A-203ENST00000366815 EVC2Q86UK5 1308 aa15.89■□□□□ 0.13
H3F3A-203ENST00000366815 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
H3F3A-203ENST00000366815 AKAP12Q02952 1782 aa15.88■□□□□ 0.13
H3F3A-203ENST00000366815 USP6P35125 1406 aa15.88■□□□□ 0.13
H3F3A-203ENST00000366815 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
H3F3A-203ENST00000366815 MARVELD3Q96A59 401 aa15.88■□□□□ 0.13
H3F3A-203ENST00000366815 LMO7Q8WWI1 1683 aa15.88■□□□□ 0.13
H3F3A-203ENST00000366815 THSD7AQ9UPZ6 1657 aa15.88■□□□□ 0.13
H3F3A-203ENST00000366815 SSH2Q76I76 1423 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 CCDC125Q86Z20 511 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
H3F3A-203ENST00000366815 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
H3F3A-203ENST00000366815 ZC3H6P61129 1189 aaKnown RBP15.86■□□□□ 0.13
H3F3A-203ENST00000366815 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms