RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 RABEP1Q15276 862 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 CWC22Q9HCG8 908 aaKnown RBP11.25□□□□□ -0.61
SMYD3-201ENST00000366516 UGGT1Q9NYU2 1555 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 PIK3R4Q99570 1358 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 CDC45O75419 566 aa11.25□□□□□ -0.61
SMYD3-201ENST00000366516 GLI2P10070 1586 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 TSR2Q969E8 191 aaKnown RBP11.24□□□□□ -0.61
SMYD3-201ENST00000366516 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
SMYD3-201ENST00000366516 CD109Q6YHK3 1445 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
SMYD3-201ENST00000366516 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 ASXL2Q76L83 1435 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 ARHGEF28Q8N1W1 1705 aaKnown RBP11.23□□□□□ -0.61
SMYD3-201ENST00000366516 ZNF500O60304 480 aaPredicted RBP11.23□□□□□ -0.61
SMYD3-201ENST00000366516 BAG4O95429 457 aaKnown RBP11.23□□□□□ -0.61
SMYD3-201ENST00000366516 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
SMYD3-201ENST00000366516 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
SMYD3-201ENST00000366516 KIF2CQ99661 725 aa11.22□□□□□ -0.61
SMYD3-201ENST00000366516 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
SMYD3-201ENST00000366516 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
SMYD3-201ENST00000366516 TULP4Q9NRJ4 1543 aa11.22□□□□□ -0.61
SMYD3-201ENST00000366516 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
SMYD3-201ENST00000366516 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.61
SMYD3-201ENST00000366516 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
SMYD3-201ENST00000366516 ST18O60284 1047 aa11.21□□□□□ -0.62
SMYD3-201ENST00000366516 ANKRD45Q5TZF3 282 aa11.21□□□□□ -0.62
SMYD3-201ENST00000366516 TSPOAP1O95153 1857 aa11.2□□□□□ -0.62
SMYD3-201ENST00000366516 RIPK4P57078 832 aa11.2□□□□□ -0.62
SMYD3-201ENST00000366516 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
SMYD3-201ENST00000366516 FCHSD2O94868 740 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 SSFA2P28290 1259 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
SMYD3-201ENST00000366516 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
SMYD3-201ENST00000366516 PDLIM2Q96JY6 352 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
SMYD3-201ENST00000366516 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
SMYD3-201ENST00000366516 MBD3O95983 291 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
SMYD3-201ENST00000366516 DYNC1I1O14576 645 aa11.18□□□□□ -0.62
SMYD3-201ENST00000366516 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
SMYD3-201ENST00000366516 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
SMYD3-201ENST00000366516 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
SMYD3-201ENST00000366516 CLTCQ00610 1675 aaKnown RBP11.18□□□□□ -0.62
SMYD3-201ENST00000366516 HECW2Q9P2P5 1572 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 A0A1W2PP64 1363 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
SMYD3-201ENST00000366516 LMOD3Q0VAK6 560 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 ABCC4O15439 1325 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 GNAI1P63096 354 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
SMYD3-201ENST00000366516 ZKSCAN5Q9Y2L8 839 aa11.17□□□□□ -0.62
SMYD3-201ENST00000366516 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 KIDINS220Q9ULH0 1771 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 REC8O95072 547 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
SMYD3-201ENST00000366516 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 CAVIN1Q6NZI2 390 aaKnown RBP11.16□□□□□ -0.62
SMYD3-201ENST00000366516 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 NPATQ14207 1427 aa11.16□□□□□ -0.62
SMYD3-201ENST00000366516 LRRC7Q96NW7 1537 aa11.15□□□□□ -0.62
SMYD3-201ENST00000366516 PHF14O94880 888 aa11.15□□□□□ -0.62
SMYD3-201ENST00000366516 MCM2P49736 904 aa11.15□□□□□ -0.62
SMYD3-201ENST00000366516 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
SMYD3-201ENST00000366516 IFT57Q9NWB7 429 aa11.15□□□□□ -0.62
SMYD3-201ENST00000366516 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.63
SMYD3-201ENST00000366516 CAPN15O75808 1086 aa11.15□□□□□ -0.63
SMYD3-201ENST00000366516 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.63
SMYD3-201ENST00000366516 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.63
SMYD3-201ENST00000366516 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.63
SMYD3-201ENST00000366516 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.63
SMYD3-201ENST00000366516 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
SMYD3-201ENST00000366516 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
SMYD3-201ENST00000366516 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
SMYD3-201ENST00000366516 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
SMYD3-201ENST00000366516 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
SMYD3-201ENST00000366516 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
SMYD3-201ENST00000366516 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
SMYD3-201ENST00000366516 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
SMYD3-201ENST00000366516 UQCRHP07919 91 aa11.12□□□□□ -0.63
SMYD3-201ENST00000366516 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
SMYD3-201ENST00000366516 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
SMYD3-201ENST00000366516 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
SMYD3-201ENST00000366516 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
SMYD3-201ENST00000366516 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
SMYD3-201ENST00000366516 ABCC3O15438 1527 aa11.11□□□□□ -0.63
SMYD3-201ENST00000366516 VAMP4O75379 141 aa11.11□□□□□ -0.63
SMYD3-201ENST00000366516 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms