RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 Q6ZNB5 142 aa6.92□□□□□ -1.3
RNU4-1-201ENST00000363925 ESF1Q9H501 851 aaKnown RBP6.92□□□□□ -1.3
RNU4-1-201ENST00000363925 TRAK2O60296 914 aa6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 MCCD1P59942 119 aaPredicted RBP6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 SLFNL1Q499Z3 407 aa6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 TRMT44Q8IYL2 757 aaKnown RBP6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 TOR4AQ9NXH8 423 aa6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
RNU4-1-201ENST00000363925 GIGYF1O75420 1035 aaPredicted RBP6.9□□□□□ -1.3
RNU4-1-201ENST00000363925 SMPD1P17405 629 aa6.9□□□□□ -1.3
RNU4-1-201ENST00000363925 SOX11P35716 441 aa6.9□□□□□ -1.3
RNU4-1-201ENST00000363925 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
RNU4-1-201ENST00000363925 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
RNU4-1-201ENST00000363925 NR5A1Q13285 461 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 RNF20Q5VTR2 975 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 CCDC116Q8IYX3 515 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 HPS1Q92902 700 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 MAP4K5Q9Y4K4 846 aa6.89□□□□□ -1.31
RNU4-1-201ENST00000363925 ARID3CA6NKF2 412 aa6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 WDR4P57081 412 aaKnown RBP6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 GLMNQ92990 594 aa6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 PGPEP1Q9NXJ5 209 aa6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 CEP126Q9P2H0 1117 aa6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
RNU4-1-201ENST00000363925 SUPT5HO00267 1087 aaKnown RBP6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 DGAT1O75907 488 aa6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 ZIC2O95409 532 aaPredicted RBP6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 NR3C2P08235 984 aa6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 GRM5P41594 1212 aa6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 MPNDQ8N594 471 aa6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 TMPRSS4Q9NRS4 437 aa6.87□□□□□ -1.31
RNU4-1-201ENST00000363925 ERVH48-1M5A8F1 160 aa6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 SKIP12755 728 aa6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 FNBP4Q8N3X1 1017 aaPredicted RBP6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 CYLDQ9NQC7 956 aa6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 EMILIN1Q9Y6C2 1016 aa6.86□□□□□ -1.31
RNU4-1-201ENST00000363925 AXIN1O15169 862 aa6.85□□□□□ -1.31
RNU4-1-201ENST00000363925 CAPN5O15484 640 aaPredicted RBP6.85□□□□□ -1.31
RNU4-1-201ENST00000363925 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
RNU4-1-201ENST00000363925 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
RNU4-1-201ENST00000363925 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 MYT1Q01538 1121 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 TRIM52Q96A61 297 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 ITPKCQ96DU7 683 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 CCDC97Q96F63 343 aaPredicted RBP6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 ALG2Q9H553 416 aa6.84□□□□□ -1.31
RNU4-1-201ENST00000363925 ESPNB1AK53 854 aa6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 ST8SIA5O15466 376 aa6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 ZNF784Q8NCA9 323 aaPredicted RBP6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 ADAMTS19Q8TE59 1207 aa6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 ARID3AQ99856 593 aa6.83□□□□□ -1.32
RNU4-1-201ENST00000363925 UPP2O95045 317 aa6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 TIMP2P16035 220 aa6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 CBLBQ13191 982 aa6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 DEPDC4Q8N2C3 294 aa6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 PLPP7Q8NBV4 271 aa6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
RNU4-1-201ENST00000363925 RFX1P22670 979 aa6.81□□□□□ -1.32
RNU4-1-201ENST00000363925 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
RNU4-1-201ENST00000363925 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
RNU4-1-201ENST00000363925 BMP1P13497 986 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 RELBQ01201 579 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 EML3Q32P44 896 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 TSGA10IPQ3SY00 556 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 CC2D2BQ6DHV5 1058 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 TRAF7Q6Q0C0 670 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 TBC1D9Q6ZT07 1266 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
RNU4-1-201ENST00000363925 BMP2P12643 396 aa6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 LMOD1P29536 600 aaPredicted RBP6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 PSME1Q06323 249 aa6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 USP4Q13107 963 aa6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 SCARF1Q14162 830 aa6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
RNU4-1-201ENST00000363925 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 ATP9BO43861 1147 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 AVPP01185 164 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 NCOA4Q13772 614 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 MAP7D1Q3KQU3 841 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 UCN2Q96RP3 112 aa6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
RNU4-1-201ENST00000363925 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 SCTRP47872 440 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 CDCA8Q53HL2 280 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 PHTF2Q8N3S3 785 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 PURBQ96QR8 312 aaKnown RBP6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 PPP1R12CQ9BZL4 782 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms