RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 DZIP1LQ8IYY4 767 aaKnown RBP29.54■■■□□ 2.32
R3HDM4-201ENST00000361574 SSH1Q8WYL5 1049 aa29.54■■■□□ 2.32
R3HDM4-201ENST00000361574 PHACTR3Q96KR7 559 aa29.53■■■□□ 2.32
R3HDM4-201ENST00000361574 RGPD1P0DJD0 1748 aa29.53■■■□□ 2.32
R3HDM4-201ENST00000361574 TTC21AQ8NDW8 1320 aa29.53■■■□□ 2.32
R3HDM4-201ENST00000361574 C8orf34Q49A92 452 aa29.52■■■□□ 2.32
R3HDM4-201ENST00000361574 SMC4Q9NTJ3 1288 aa29.52■■■□□ 2.32
R3HDM4-201ENST00000361574 TNNQ9UQP3 1299 aa29.52■■■□□ 2.32
R3HDM4-201ENST00000361574 CEP170BQ9Y4F5 1589 aaPredicted RBP29.52■■■□□ 2.32
R3HDM4-201ENST00000361574 KIF16BQ96L93 1317 aa29.51■■■□□ 2.32
R3HDM4-201ENST00000361574 LMOD3Q0VAK6 560 aa29.51■■■□□ 2.31
R3HDM4-201ENST00000361574 ZBTB47Q9UFB7 747 aaPredicted RBP29.51■■■□□ 2.31
R3HDM4-201ENST00000361574 ANKARQ7Z5J8 1434 aa29.5■■■□□ 2.31
R3HDM4-201ENST00000361574 ZNF853P0CG23 659 aa29.5■■■□□ 2.31
R3HDM4-201ENST00000361574 IFT57Q9NWB7 429 aa29.5■■■□□ 2.31
R3HDM4-201ENST00000361574 PCDHB15Q9Y5E8 787 aa29.5■■■□□ 2.31
R3HDM4-201ENST00000361574 ATF7IPQ6VMQ6 1270 aa29.49■■■□□ 2.31
R3HDM4-201ENST00000361574 PEAK1Q9H792 1746 aa29.49■■■□□ 2.31
R3HDM4-201ENST00000361574 PAK3O75914 559 aaPredicted RBP29.48■■■□□ 2.31
R3HDM4-201ENST00000361574 HMOX1P09601 288 aa29.48■■■□□ 2.31
R3HDM4-201ENST00000361574 TRIM27P14373 513 aa29.48■■■□□ 2.31
R3HDM4-201ENST00000361574 RRS1Q15050 365 aaKnown RBP29.48■■■□□ 2.31
R3HDM4-201ENST00000361574 USP54Q70EL1 1684 aa29.47■■■□□ 2.31
R3HDM4-201ENST00000361574 GNAI1P63096 354 aa29.47■■■□□ 2.31
R3HDM4-201ENST00000361574 ZNF142P52746 1687 aaPredicted RBP29.46■■■□□ 2.31
R3HDM4-201ENST00000361574 IPO8O15397 1037 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-201ENST00000361574 FTSJ3Q8IY81 847 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-201ENST00000361574 RWDD1Q9H446 243 aaPredicted RBP29.46■■■□□ 2.31
R3HDM4-201ENST00000361574 DDX19BQ9UMR2 479 aa29.45■■■□□ 2.3
R3HDM4-201ENST00000361574 FMN2Q9NZ56 1722 aa29.44■■■□□ 2.3
R3HDM4-201ENST00000361574 RGPD8O14715 1765 aaPredicted RBP29.44■■■□□ 2.3
R3HDM4-201ENST00000361574 DDRGK1Q96HY6 314 aa29.43■■■□□ 2.3
R3HDM4-201ENST00000361574 RGS3P49796 1198 aa29.42■■■□□ 2.3
R3HDM4-201ENST00000361574 EIF4A2Q14240 407 aaKnown RBP29.42■■■□□ 2.3
R3HDM4-201ENST00000361574 NOB1Q9ULX3 412 aaKnown RBP29.41■■■□□ 2.3
R3HDM4-201ENST00000361574 NPM2Q86SE8 214 aaKnown RBP29.4■■■□□ 2.3
R3HDM4-201ENST00000361574 ARHGAP45Q92619 1136 aa29.4■■■□□ 2.3
R3HDM4-201ENST00000361574 CFAP44Q96MT7 982 aa29.4■■■□□ 2.3
R3HDM4-201ENST00000361574 HDAC1Q13547 482 aaPredicted RBP29.39■■■□□ 2.3
R3HDM4-201ENST00000361574 PIK3C2AO00443 1686 aa29.39■■■□□ 2.29
R3HDM4-201ENST00000361574 VAMP4O75379 141 aa29.38■■■□□ 2.29
R3HDM4-201ENST00000361574 CHD2O14647 1828 aaKnown RBP29.38■■■□□ 2.29
R3HDM4-201ENST00000361574 ARHGEF10O15013 1369 aa29.36■■■□□ 2.29
R3HDM4-201ENST00000361574 MBIPQ9NS73 344 aa29.35■■■□□ 2.29
R3HDM4-201ENST00000361574 SBNO1A3KN83 1393 aa29.34■■■□□ 2.29
R3HDM4-201ENST00000361574 ADAMTSL3P82987 1691 aa29.34■■■□□ 2.29
R3HDM4-201ENST00000361574 ZBTB40Q9NUA8 1239 aa29.34■■■□□ 2.29
R3HDM4-201ENST00000361574 MARF1Q9Y4F3 1742 aaKnown RBP29.34■■■□□ 2.29
R3HDM4-201ENST00000361574 KIF24Q5T7B8 1368 aa29.33■■■□□ 2.29
R3HDM4-201ENST00000361574 MRPL50Q8N5N7 158 aaKnown RBP29.33■■■□□ 2.29
R3HDM4-201ENST00000361574 TMEM57Q8N5G2 664 aa29.32■■■□□ 2.28
R3HDM4-201ENST00000361574 PDZRN3Q9UPQ7 1066 aa29.32■■■□□ 2.28
R3HDM4-201ENST00000361574 FLT4P35916 1363 aa29.32■■■□□ 2.28
R3HDM4-201ENST00000361574 NUTM2FA1L443 756 aa29.31■■■□□ 2.28
R3HDM4-201ENST00000361574 THUMPD2Q9BTF0 503 aaKnown RBP29.31■■■□□ 2.28
R3HDM4-201ENST00000361574 ITPRIPQ8IWB1 547 aa29.31■■■□□ 2.28
R3HDM4-201ENST00000361574 KDRP35968 1356 aa29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 KCNA6P17658 529 aa29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 SULT6B1Q6IMI4 303 aa29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 CHMP4BQ9H444 224 aaKnown RBP29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 NGDNQ8NEJ9 315 aaKnown RBP29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 LAS1LQ9Y4W2 734 aaKnown RBP29.29■■■□□ 2.28
R3HDM4-201ENST00000361574 MAP3K19Q56UN5 1328 aa29.28■■■□□ 2.28
R3HDM4-201ENST00000361574 SETD1BQ9UPS6 1966 aaKnown RBP29.28■■■□□ 2.28
R3HDM4-201ENST00000361574 AEBP1Q8IUX7 1158 aa29.28■■■□□ 2.28
R3HDM4-201ENST00000361574 HSP90AB2PQ58FF8 381 aa29.27■■■□□ 2.28
R3HDM4-201ENST00000361574 SMC5Q8IY18 1101 aa29.27■■■□□ 2.28
R3HDM4-201ENST00000361574 TSPYL6Q8N831 410 aa29.26■■■□□ 2.27
R3HDM4-201ENST00000361574 KIAA0232Q92628 1395 aa29.25■■■□□ 2.27
R3HDM4-201ENST00000361574 TWISTNBQ3B726 338 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-201ENST00000361574 ABCC4O15439 1325 aa29.24■■■□□ 2.27
R3HDM4-201ENST00000361574 HAP1P54257 671 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-201ENST00000361574 ANKLE2Q86XL3 938 aa29.24■■■□□ 2.27
R3HDM4-201ENST00000361574 CHL1O00533 1208 aa29.22■■■□□ 2.27
R3HDM4-201ENST00000361574 PLPPR3Q6T4P5 718 aa29.22■■■□□ 2.27
R3HDM4-201ENST00000361574 FAM83GA6ND36 823 aa29.22■■■□□ 2.27
R3HDM4-201ENST00000361574 IGSF1Q8N6C5 1336 aa29.22■■■□□ 2.27
R3HDM4-201ENST00000361574 USP19O94966 1318 aa29.21■■■□□ 2.27
R3HDM4-201ENST00000361574 C8orf58Q8NAV2 365 aa29.21■■■□□ 2.27
R3HDM4-201ENST00000361574 CRB1P82279 1406 aa29.2■■■□□ 2.26
R3HDM4-201ENST00000361574 ZBTB7BO15156 539 aaPredicted RBP29.18■■■□□ 2.26
R3HDM4-201ENST00000361574 API5Q9BZZ5 524 aaKnown RBP29.18■■■□□ 2.26
R3HDM4-201ENST00000361574 DCTN1Q14203 1278 aa29.16■■■□□ 2.26
R3HDM4-201ENST00000361574 LRRC37A3O60309 1634 aa29.16■■■□□ 2.26
R3HDM4-201ENST00000361574 NWD1Q149M9 1564 aa29.15■■■□□ 2.26
R3HDM4-201ENST00000361574 ADGRL3Q9HAR2 1447 aa29.15■■■□□ 2.26
R3HDM4-201ENST00000361574 RTL1A6NKG5 1358 aa29.15■■■□□ 2.26
R3HDM4-201ENST00000361574 HTATSF1O43719 755 aaKnown RBP29.13■■■□□ 2.25
R3HDM4-201ENST00000361574 NLRP6P59044 892 aa29.13■■■□□ 2.25
R3HDM4-201ENST00000361574 AMPHP49418 695 aa29.12■■■□□ 2.25
R3HDM4-201ENST00000361574 PHRF1Q9P1Y6 1649 aaKnown RBP29.11■■■□□ 2.25
R3HDM4-201ENST00000361574 NUCB1Q02818 461 aa29.1■■■□□ 2.25
R3HDM4-201ENST00000361574 EYA1Q99502 592 aa29.1■■■□□ 2.25
R3HDM4-201ENST00000361574 GAS2L2Q8NHY3 880 aa29.1■■■□□ 2.25
R3HDM4-201ENST00000361574 PHF8Q9UPP1 1060 aa29.09■■■□□ 2.25
R3HDM4-201ENST00000361574 ELL2O00472 640 aaPredicted RBP29.08■■■□□ 2.25
R3HDM4-201ENST00000361574 HOXC9P31274 260 aa29.08■■■□□ 2.25
R3HDM4-201ENST00000361574 SEC24BO95487 1268 aa29.08■■■□□ 2.25
R3HDM4-201ENST00000361574 MTHFSDQ2M296 383 aaKnown RBP29.08■■■□□ 2.25
R3HDM4-201ENST00000361574 MCM10Q7L590 875 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms