RNA–Protein interactions for RNA: ENST00000359865.7

MTCL1-202, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MTCL1, Length 6,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-202ENST00000359865 SMC3Q9UQE7 1217 aa16.99■□□□□ 0.31
MTCL1-202ENST00000359865 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
MTCL1-202ENST00000359865 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
MTCL1-202ENST00000359865 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■■■□ 22.5
MTCL1-202ENST00000359865 SART3Q15020 963 aaKnown RBP16.98■□□□□ 0.31
MTCL1-202ENST00000359865 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
MTCL1-202ENST00000359865 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
MTCL1-202ENST00000359865 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
MTCL1-202ENST00000359865 MPHOSPH8Q99549 860 aa16.98■□□□□ 0.31
MTCL1-202ENST00000359865 MSH6P52701 1360 aa16.98■□□□□ 0.31
MTCL1-202ENST00000359865 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
MTCL1-202ENST00000359865 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
MTCL1-202ENST00000359865 SKOR2Q2VWA4 1001 aaPredicted RBP16.97■□□□□ 0.31
MTCL1-202ENST00000359865 BRMS1Q9HCU9 246 aa16.97■□□□□ 0.31
MTCL1-202ENST00000359865 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
MTCL1-202ENST00000359865 NOC3LQ8WTT2 800 aaKnown RBP16.96■□□□□ 0.31
MTCL1-202ENST00000359865 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
MTCL1-202ENST00000359865 HOOK1Q9UJC3 728 aaKnown RBP16.96■□□□□ 0.31
MTCL1-202ENST00000359865 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
MTCL1-202ENST00000359865 NGLY1Q96IV0 654 aa16.96■□□□□ 0.31
MTCL1-202ENST00000359865 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.3
MTCL1-202ENST00000359865 ZNF652Q9Y2D9 606 aa16.95■□□□□ 0.3
MTCL1-202ENST00000359865 XBP1P17861 261 aa16.95■□□□□ 0.3
MTCL1-202ENST00000359865 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
MTCL1-202ENST00000359865 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
MTCL1-202ENST00000359865 DEKP35659 375 aaKnown RBP16.95■□□□□ 0.3
MTCL1-202ENST00000359865 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
MTCL1-202ENST00000359865 NSD2O96028 1365 aa16.95■□□□□ 0.3
MTCL1-202ENST00000359865 RPRD2Q5VT52 1461 aaKnown RBP16.94■□□□□ 0.3
MTCL1-202ENST00000359865 IKQ13123 557 aaPredicted RBP16.94■□□□□ 0.3
MTCL1-202ENST00000359865 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 TPM3P06753 285 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
MTCL1-202ENST00000359865 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 SIL1Q9H173 461 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
MTCL1-202ENST00000359865 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
MTCL1-202ENST00000359865 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
MTCL1-202ENST00000359865 BCAR3O75815 825 aa16.93■□□□□ 0.3
MTCL1-202ENST00000359865 BICDL1Q6ZP65 573 aa16.93■□□□□ 0.3
MTCL1-202ENST00000359865 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
MTCL1-202ENST00000359865 BECN2A8MW95 431 aa16.93■□□□□ 0.3
MTCL1-202ENST00000359865 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
MTCL1-202ENST00000359865 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 TPM1P09493 284 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 FOSBP53539 338 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
MTCL1-202ENST00000359865 ZPR1O75312 459 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
MTCL1-202ENST00000359865 MCM10Q7L590 875 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
MTCL1-202ENST00000359865 EMILIN1Q9Y6C2 1016 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
MTCL1-202ENST00000359865 EXOC5O00471 708 aa16.9■□□□□ 0.3
MTCL1-202ENST00000359865 TRAPPC8Q9Y2L5 1435 aa16.9■□□□□ 0.3
MTCL1-202ENST00000359865 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
MTCL1-202ENST00000359865 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
MTCL1-202ENST00000359865 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
MTCL1-202ENST00000359865 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
MTCL1-202ENST00000359865 ACEP12821 1306 aa16.89■□□□□ 0.29
MTCL1-202ENST00000359865 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
MTCL1-202ENST00000359865 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.89■□□□□ 0.29
MTCL1-202ENST00000359865 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
MTCL1-202ENST00000359865 NUCB2P80303 420 aa16.89■□□□□ 0.29
MTCL1-202ENST00000359865 TOM1O60784 492 aa16.88■□□□□ 0.29
MTCL1-202ENST00000359865 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
MTCL1-202ENST00000359865 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
MTCL1-202ENST00000359865 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
MTCL1-202ENST00000359865 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
MTCL1-202ENST00000359865 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
MTCL1-202ENST00000359865 RBM5P52756 815 aaKnown RBP eCLIP16.87■□□□□ 0.29
MTCL1-202ENST00000359865 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
MTCL1-202ENST00000359865 AACSQ86V21 672 aa16.87■□□□□ 0.29
MTCL1-202ENST00000359865 NUP160Q12769 1436 aa16.87■□□□□ 0.29
MTCL1-202ENST00000359865 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
MTCL1-202ENST00000359865 ANKRD36BQ8N2N9 1353 aa16.86■□□□□ 0.29
MTCL1-202ENST00000359865 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
MTCL1-202ENST00000359865 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
MTCL1-202ENST00000359865 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
MTCL1-202ENST00000359865 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
MTCL1-202ENST00000359865 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
MTCL1-202ENST00000359865 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
MTCL1-202ENST00000359865 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
MTCL1-202ENST00000359865 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 PDE4CQ08493 712 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
MTCL1-202ENST00000359865 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
MTCL1-202ENST00000359865 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.29
MTCL1-202ENST00000359865 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
MTCL1-202ENST00000359865 MYD88Q99836 296 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms