RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 CDC42BPGQ6DT37 1551 aa11.76□□□□□ -0.53
GTF3C2-202ENST00000359541 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
GTF3C2-202ENST00000359541 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
GTF3C2-202ENST00000359541 IL13P35225 146 aa11.74□□□□□ -0.53
GTF3C2-202ENST00000359541 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
GTF3C2-202ENST00000359541 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
GTF3C2-202ENST00000359541 PLEKHG1Q9ULL1 1385 aa11.73□□□□□ -0.53
GTF3C2-202ENST00000359541 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
GTF3C2-202ENST00000359541 CPS1P31327 1500 aa11.73□□□□□ -0.53
GTF3C2-202ENST00000359541 PKNOX2Q96KN3 472 aa11.73□□□□□ -0.53
GTF3C2-202ENST00000359541 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 RRS1Q15050 365 aaKnown RBP11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
GTF3C2-202ENST00000359541 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.53
GTF3C2-202ENST00000359541 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
GTF3C2-202ENST00000359541 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.54
GTF3C2-202ENST00000359541 SETD1AO15047 1707 aaKnown RBP11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 FBLN1P23142 703 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 NGDNQ8NEJ9 315 aaKnown RBP11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 ZBTB40Q9NUA8 1239 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 ACEP12821 1306 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 PLEKHG3A1L390 1219 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 GCC1Q96CN9 775 aa11.7□□□□□ -0.54
GTF3C2-202ENST00000359541 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 HOMEZQ8IX15 550 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 KIF13AQ9H1H9 1805 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 MBIPQ9NS73 344 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 NUTM2FA1L443 756 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 VAMP4O75379 141 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 NFKBIBQ15653 356 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 SULT6B1Q6IMI4 303 aa11.69□□□□□ -0.54
GTF3C2-202ENST00000359541 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 THUMPD2Q9BTF0 503 aaKnown RBP11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 A0A0G2JS52 829 aa11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
GTF3C2-202ENST00000359541 PRR36Q9H6K5 1346 aa11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 NCKAP5LQ9HCH0 1330 aa11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
GTF3C2-202ENST00000359541 AMPHP49418 695 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 EIF4A2Q14240 407 aaKnown RBP11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 USP6P35125 1406 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 SOX12O15370 315 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
GTF3C2-202ENST00000359541 LTKP29376 864 aa11.65□□□□□ -0.54
GTF3C2-202ENST00000359541 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.54
GTF3C2-202ENST00000359541 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
GTF3C2-202ENST00000359541 NUCB1Q02818 461 aa11.65□□□□□ -0.54
GTF3C2-202ENST00000359541 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.55
GTF3C2-202ENST00000359541 C14orf37Q86TY3 774 aa11.65□□□□□ -0.55
GTF3C2-202ENST00000359541 LNPKQ9C0E8 428 aa11.65□□□□□ -0.55
GTF3C2-202ENST00000359541 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
GTF3C2-202ENST00000359541 KIF24Q5T7B8 1368 aa11.64□□□□□ -0.55
GTF3C2-202ENST00000359541 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-202ENST00000359541 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
GTF3C2-202ENST00000359541 SEC24BO95487 1268 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 ABCC4O15439 1325 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 FLT4P35916 1363 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 PIK3R4Q99570 1358 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
GTF3C2-202ENST00000359541 C3P01024 1663 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 GSE1Q14687 1217 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 USP19O94966 1318 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 ARHGEF10O15013 1369 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 SLKQ9H2G2 1235 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 PTPRCP08575 1304 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
GTF3C2-202ENST00000359541 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 USP31Q70CQ4 1352 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 KIAA0232Q92628 1395 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 BMP2KLQ5H9B9 411 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 HMMRO75330 724 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms