RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
RPE-202ENST00000359429 FCHSD2O94868 740 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 HMOX1P09601 288 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 IDI1Q13907 227 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
RPE-202ENST00000359429 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 ABCC3O15438 1527 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
RPE-202ENST00000359429 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
RPE-202ENST00000359429 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
RPE-202ENST00000359429 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
RPE-202ENST00000359429 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
RPE-202ENST00000359429 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
RPE-202ENST00000359429 CABP1Q9NZU7 370 aa13.52□□□□□ -0.24
RPE-202ENST00000359429 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
RPE-202ENST00000359429 PTCH1Q13635 1447 aa13.52□□□□□ -0.25
RPE-202ENST00000359429 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
RPE-202ENST00000359429 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
RPE-202ENST00000359429 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.257e-7■□□□□ 9.5
RPE-202ENST00000359429 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
RPE-202ENST00000359429 ABCC4O15439 1325 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 PTPRMP28827 1452 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 RRP9O43818 475 aaKnown RBP13.51□□□□□ -0.25
RPE-202ENST00000359429 CDC45O75419 566 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
RPE-202ENST00000359429 PKP1Q13835 747 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
RPE-202ENST00000359429 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
RPE-202ENST00000359429 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
RPE-202ENST00000359429 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
RPE-202ENST00000359429 PPP1R9BQ96SB3 815 aa13.5□□□□□ -0.25
RPE-202ENST00000359429 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
RPE-202ENST00000359429 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
RPE-202ENST00000359429 POGZQ7Z3K3 1410 aa13.49□□□□□ -0.25
RPE-202ENST00000359429 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
RPE-202ENST00000359429 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
RPE-202ENST00000359429 PTMSP20962 102 aa13.49□□□□□ -0.25
RPE-202ENST00000359429 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
RPE-202ENST00000359429 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
RPE-202ENST00000359429 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
RPE-202ENST00000359429 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
RPE-202ENST00000359429 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
RPE-202ENST00000359429 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
RPE-202ENST00000359429 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
RPE-202ENST00000359429 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
RPE-202ENST00000359429 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
RPE-202ENST00000359429 GOLGA6L22H0YM25 854 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 FAM83GA6ND36 823 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
RPE-202ENST00000359429 USP26Q9BXU7 913 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
RPE-202ENST00000359429 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
RPE-202ENST00000359429 GNAI1P63096 354 aa13.46□□□□□ -0.25
RPE-202ENST00000359429 CAVIN1Q6NZI2 390 aaKnown RBP13.46□□□□□ -0.25
RPE-202ENST00000359429 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
RPE-202ENST00000359429 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
RPE-202ENST00000359429 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
RPE-202ENST00000359429 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
RPE-202ENST00000359429 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
RPE-202ENST00000359429 ZFYVE9O95405 1425 aa13.46□□□□□ -0.25
RPE-202ENST00000359429 RABEP1Q15276 862 aa13.46□□□□□ -0.26
RPE-202ENST00000359429 TTC22Q5TAA0 569 aa13.46□□□□□ -0.26
RPE-202ENST00000359429 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.26
RPE-202ENST00000359429 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.26
RPE-202ENST00000359429 DCTPP1Q9H773 170 aa13.46□□□□□ -0.26
RPE-202ENST00000359429 NCLP19338 710 aaKnown RBP13.45□□□□□ -0.26
RPE-202ENST00000359429 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
RPE-202ENST00000359429 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
RPE-202ENST00000359429 ZGPATQ8N5A5 531 aaKnown RBP13.45□□□□□ -0.26
RPE-202ENST00000359429 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
RPE-202ENST00000359429 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
RPE-202ENST00000359429 IL13P35225 146 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 ZNF445P59923 1031 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 RBSNQ9H1K0 784 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
RPE-202ENST00000359429 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
RPE-202ENST00000359429 RBM27Q9P2N5 1060 aaKnown RBP13.43□□□□□ -0.26
RPE-202ENST00000359429 ZDHHC9Q9Y397 364 aa13.43□□□□□ -0.26
RPE-202ENST00000359429 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
RPE-202ENST00000359429 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
RPE-202ENST00000359429 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
RPE-202ENST00000359429 APBB1O00213 710 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 TPM2P07951 284 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 SDSP20132 328 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
RPE-202ENST00000359429 NUCB2P80303 420 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms