RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 ME1P48163 572 aa19.41■□□□□ 0.7
LMBR1-202ENST00000359422 GNL3LQ9NVN8 582 aaKnown RBP19.41■□□□□ 0.7
LMBR1-202ENST00000359422 WDR33Q9C0J8 1336 aaKnown RBP19.41■□□□□ 0.7
LMBR1-202ENST00000359422 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
LMBR1-202ENST00000359422 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
LMBR1-202ENST00000359422 MPNDQ8N594 471 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 SPC24Q8NBT2 197 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 CDK5RAP3Q96JB5 506 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 KRT85P78386 507 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 TRIM22Q8IYM9 498 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 STK11IPQ8N1F8 1099 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
LMBR1-202ENST00000359422 BLOC1S2Q6QNY1 142 aa19.39■□□□□ 0.7
LMBR1-202ENST00000359422 RAPGEF3O95398 923 aa19.39■□□□□ 0.69
LMBR1-202ENST00000359422 CCDC57Q2TAC2 916 aa19.39■□□□□ 0.69
LMBR1-202ENST00000359422 FCHSD2O94868 740 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 FKBP4Q02790 459 aaKnown RBP eCLIP19.38■□□□□ 0.69
LMBR1-202ENST00000359422 AACSQ86V21 672 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
LMBR1-202ENST00000359422 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
LMBR1-202ENST00000359422 ATP2B2Q01814 1243 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 AEBP1Q8IUX7 1158 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 SMARCE1Q969G3 411 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 MAGEC2Q9UBF1 373 aaPredicted RBP19.37■□□□□ 0.69
LMBR1-202ENST00000359422 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
LMBR1-202ENST00000359422 TNMDQ9H2S6 317 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
LMBR1-202ENST00000359422 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
LMBR1-202ENST00000359422 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
LMBR1-202ENST00000359422 SERPINC1P01008 464 aa19.36■□□□□ 0.69
LMBR1-202ENST00000359422 HMGN5P82970 282 aaKnown RBP19.36■□□□□ 0.69
LMBR1-202ENST00000359422 HSP90AB2PQ58FF8 381 aa19.36■□□□□ 0.69
LMBR1-202ENST00000359422 ERBINQ96RT1 1412 aa19.36■□□□□ 0.69
LMBR1-202ENST00000359422 CWC27Q6UX04 472 aaKnown RBP19.36■□□□□ 0.69
LMBR1-202ENST00000359422 TMPOP42166 694 aaKnown RBP19.35■□□□□ 0.69
LMBR1-202ENST00000359422 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
LMBR1-202ENST00000359422 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
LMBR1-202ENST00000359422 MTERF4Q7Z6M4 381 aaKnown RBP19.34■□□□□ 0.69
LMBR1-202ENST00000359422 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
LMBR1-202ENST00000359422 MAP7D2Q96T17 732 aa19.34■□□□□ 0.69
LMBR1-202ENST00000359422 EXOC6BQ9Y2D4 811 aa19.34■□□□□ 0.69
LMBR1-202ENST00000359422 JAKMIP1Q96N16 626 aaKnown RBP19.34■□□□□ 0.69
LMBR1-202ENST00000359422 THUMPD2Q9BTF0 503 aaKnown RBP19.34■□□□□ 0.69
LMBR1-202ENST00000359422 TMEM57Q8N5G2 664 aa19.34■□□□□ 0.69
LMBR1-202ENST00000359422 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
LMBR1-202ENST00000359422 NFE2L2Q16236 605 aa19.33■□□□□ 0.69
LMBR1-202ENST00000359422 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.68
LMBR1-202ENST00000359422 SLFN5Q08AF3 891 aa19.33■□□□□ 0.68
LMBR1-202ENST00000359422 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
LMBR1-202ENST00000359422 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
LMBR1-202ENST00000359422 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.32■□□□□ 0.683e-6■■■■■ 87
LMBR1-202ENST00000359422 MCM4P33991 863 aa19.32■□□□□ 0.68
LMBR1-202ENST00000359422 ZNHIT6Q9NWK9 470 aaKnown RBP19.32■□□□□ 0.68
LMBR1-202ENST00000359422 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
LMBR1-202ENST00000359422 CCDC69A6NI79 296 aa19.31■□□□□ 0.68
LMBR1-202ENST00000359422 CCP110O43303 1012 aa19.31■□□□□ 0.68
LMBR1-202ENST00000359422 ZC3H6P61129 1189 aaKnown RBP19.31■□□□□ 0.68
LMBR1-202ENST00000359422 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
LMBR1-202ENST00000359422 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
LMBR1-202ENST00000359422 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
LMBR1-202ENST00000359422 ZHX3Q9H4I2 956 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 GRPEL1Q9HAV7 217 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 RPGRIP1LQ68CZ1 1315 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 CTNNA3Q9UI47 895 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 CIZ1Q9ULV3 898 aaPredicted RBP19.3■□□□□ 0.68
LMBR1-202ENST00000359422 SPATA32Q96LK8 384 aa19.3■□□□□ 0.68
LMBR1-202ENST00000359422 PPFIBP1Q86W92 1011 aa19.29■□□□□ 0.68
LMBR1-202ENST00000359422 SKIDA1Q1XH10 827 aa19.29■□□□□ 0.68
LMBR1-202ENST00000359422 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
LMBR1-202ENST00000359422 NUDT16Q96DE0 195 aaKnown RBP19.29■□□□□ 0.68
LMBR1-202ENST00000359422 TMEM132AQ24JP5 1023 aa19.29■□□□□ 0.68
LMBR1-202ENST00000359422 ZSCAN31Q96LW9 406 aaPredicted RBP19.29■□□□□ 0.68
LMBR1-202ENST00000359422 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
LMBR1-202ENST00000359422 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
LMBR1-202ENST00000359422 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
LMBR1-202ENST00000359422 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 TDO2P48775 406 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 STIM1Q13586 685 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
LMBR1-202ENST00000359422 CFAP45Q9UL16 551 aa19.28■□□□□ 0.68
LMBR1-202ENST00000359422 KRT32Q14532 448 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 SYCP1Q15431 976 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 NUTM1Q86Y26 1132 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 UBAC1Q9BSL1 405 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
LMBR1-202ENST00000359422 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
LMBR1-202ENST00000359422 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 H0YHG0 523 aa19.27■□□□□ 0.68
LMBR1-202ENST00000359422 DUSP27Q5VZP5 1158 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms