RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
NUP98-203ENST00000359171 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.344e-7■■■□□ 17.5
NUP98-203ENST00000359171 PTPRGP23470 1445 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 BCAR3O75815 825 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 EZRP15311 586 aaKnown RBP17.16■□□□□ 0.34
NUP98-203ENST00000359171 KDM4AO75164 1064 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 BLOC1S2Q6QNY1 142 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
NUP98-203ENST00000359171 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
NUP98-203ENST00000359171 ENOX2Q16206 610 aaKnown RBP17.15■□□□□ 0.34
NUP98-203ENST00000359171 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
NUP98-203ENST00000359171 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
NUP98-203ENST00000359171 CDKL5O76039 1030 aa17.15■□□□□ 0.34
NUP98-203ENST00000359171 MAP3K11Q16584 847 aa17.14■□□□□ 0.33
NUP98-203ENST00000359171 ARHGAP29Q52LW3 1261 aa17.14■□□□□ 0.33
NUP98-203ENST00000359171 NACAP1Q9BZK3 213 aa17.14■□□□□ 0.33
NUP98-203ENST00000359171 KRT32Q14532 448 aa17.14■□□□□ 0.33
NUP98-203ENST00000359171 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
NUP98-203ENST00000359171 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
NUP98-203ENST00000359171 PDRG1Q9NUG6 133 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 STK3Q13188 491 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
NUP98-203ENST00000359171 TAX1BP1Q86VP1 789 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 EPB41L2O43491 1005 aaKnown RBP17.13■□□□□ 0.33
NUP98-203ENST00000359171 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
NUP98-203ENST00000359171 CUX1P39880 1505 aa17.12■□□□□ 0.33
NUP98-203ENST00000359171 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
NUP98-203ENST00000359171 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
NUP98-203ENST00000359171 CRACR2AQ9BSW2 395 aa17.12■□□□□ 0.33
NUP98-203ENST00000359171 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
NUP98-203ENST00000359171 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
NUP98-203ENST00000359171 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
NUP98-203ENST00000359171 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
NUP98-203ENST00000359171 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
NUP98-203ENST00000359171 FAM193AP78312 1265 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 ANKRD62A6NC57 917 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
NUP98-203ENST00000359171 CCDC148Q8NFR7 591 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 TAF4BQ92750 862 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
NUP98-203ENST00000359171 NLRP6P59044 892 aa17.11■□□□□ 0.33
NUP98-203ENST00000359171 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
NUP98-203ENST00000359171 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 SYCE3A1L190 88 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
NUP98-203ENST00000359171 KIF18AQ8NI77 898 aa17.09■□□□□ 0.33
NUP98-203ENST00000359171 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
NUP98-203ENST00000359171 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
NUP98-203ENST00000359171 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
NUP98-203ENST00000359171 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
NUP98-203ENST00000359171 CFAP100Q494V2 611 aa17.08■□□□□ 0.32
NUP98-203ENST00000359171 MAP9Q49MG5 647 aa17.08■□□□□ 0.32
NUP98-203ENST00000359171 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
NUP98-203ENST00000359171 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.32
NUP98-203ENST00000359171 WASF1Q92558 559 aa17.08■□□□□ 0.32
NUP98-203ENST00000359171 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.32
NUP98-203ENST00000359171 MCM3P25205 808 aa17.07■□□□□ 0.32
NUP98-203ENST00000359171 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
NUP98-203ENST00000359171 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
NUP98-203ENST00000359171 KIAA1328Q86T90 577 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
NUP98-203ENST00000359171 FAM107BQ9H098 131 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 IMMTQ16891 758 aaKnown RBP17.06■□□□□ 0.32
NUP98-203ENST00000359171 CCDC183Q5T5S1 534 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 DYDC1Q8WWB3 177 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 ANO10Q9NW15 660 aa17.06■□□□□ 0.32
NUP98-203ENST00000359171 MCM5P33992 734 aa17.05■□□□□ 0.32
NUP98-203ENST00000359171 KIF6Q6ZMV9 814 aa17.05■□□□□ 0.32
NUP98-203ENST00000359171 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
NUP98-203ENST00000359171 NEMFO60524 1076 aa17.05■□□□□ 0.32
NUP98-203ENST00000359171 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
NUP98-203ENST00000359171 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
NUP98-203ENST00000359171 GBP2P32456 591 aaPredicted RBP17.04■□□□□ 0.32
NUP98-203ENST00000359171 TMEM132EQ6IEE7 984 aa17.04■□□□□ 0.32
NUP98-203ENST00000359171 ZHX3Q9H4I2 956 aa17.04■□□□□ 0.32
NUP98-203ENST00000359171 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
NUP98-203ENST00000359171 PAF1Q8N7H5 531 aa17.04■□□□□ 0.32
NUP98-203ENST00000359171 SLC26A8Q96RN1 970 aa17.03■□□□□ 0.32
NUP98-203ENST00000359171 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
NUP98-203ENST00000359171 KIF5CO60282 957 aa17.03■□□□□ 0.32
NUP98-203ENST00000359171 CBX1P83916 185 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms