RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
KCNIP4-201ENST00000359001 FTSJ3Q8IY81 847 aaKnown RBP9.01□□□□□ -0.97
KCNIP4-201ENST00000359001 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
KCNIP4-201ENST00000359001 PTCH1Q13635 1447 aa9.01□□□□□ -0.97
KCNIP4-201ENST00000359001 SEC24BO95487 1268 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 ZNF428Q96B54 188 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 PHACTR3Q96KR7 559 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 ZRANB1Q9UGI0 708 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 DDX19BQ9UMR2 479 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 PEAK1Q9H792 1746 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 NCKAP5LQ9HCH0 1330 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 PIK3R4Q99570 1358 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 ARHGAP23Q9P227 1491 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 SLIT1O75093 1534 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 ZNF853P0CG23 659 aa9□□□□□ -0.97
KCNIP4-201ENST00000359001 HDGFP51858 240 aaKnown RBP9□□□□□ -0.97
KCNIP4-201ENST00000359001 NOB1Q9ULX3 412 aaKnown RBP9□□□□□ -0.97
KCNIP4-201ENST00000359001 RIMS1Q86UR5 1692 aaKnown RBP9□□□□□ -0.97
KCNIP4-201ENST00000359001 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 ZBTB40Q9NUA8 1239 aa8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 PTPRUQ92729 1446 aa8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 NEFMP07197 916 aa8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 TMEM57Q8N5G2 664 aa8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 ESF1Q9H501 851 aaKnown RBP8.99□□□□□ -0.97
KCNIP4-201ENST00000359001 SSH2Q76I76 1423 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 FMN2Q9NZ56 1722 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 HMOX1P09601 288 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 SMC5Q8IY18 1101 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 COG3Q96JB2 828 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 ZNF692Q9BU19 519 aaPredicted RBP8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 IFT57Q9NWB7 429 aa8.98□□□□□ -0.97
KCNIP4-201ENST00000359001 ITPRIPQ8IWB1 547 aa8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 USP6P35125 1406 aa8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 VAMP4O75379 141 aa8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 DIP2AQ14689 1571 aa8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 USP31Q70CQ4 1352 aa8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 XRN1Q8IZH2 1706 aaKnown RBP8.97□□□□□ -0.97
KCNIP4-201ENST00000359001 TTC21BQ7Z4L5 1316 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 LTKP29376 864 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 GNAI1P63096 354 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 MRPL50Q8N5N7 158 aaKnown RBP8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 ARHGAP45Q92619 1136 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 TBC1D32Q96NH3 1257 aa8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 THUMPD2Q9BTF0 503 aaKnown RBP8.96□□□□□ -0.97
KCNIP4-201ENST00000359001 FER1L4A9Z1Z3 1794 aa8.96□□□□□ -0.98
KCNIP4-201ENST00000359001 NFKBIBQ15653 356 aa8.96□□□□□ -0.98
KCNIP4-201ENST00000359001 MBIPQ9NS73 344 aa8.96□□□□□ -0.98
KCNIP4-201ENST00000359001 USP54Q70EL1 1684 aa8.96□□□□□ -0.98
KCNIP4-201ENST00000359001 ABCC4O15439 1325 aa8.95□□□□□ -0.98
KCNIP4-201ENST00000359001 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
KCNIP4-201ENST00000359001 TSPYL6Q8N831 410 aa8.95□□□□□ -0.98
KCNIP4-201ENST00000359001 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
KCNIP4-201ENST00000359001 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
KCNIP4-201ENST00000359001 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
KCNIP4-201ENST00000359001 PIK3C2AO00443 1686 aa8.94□□□□□ -0.98
KCNIP4-201ENST00000359001 ACEP12821 1306 aa8.94□□□□□ -0.98
KCNIP4-201ENST00000359001 DAXXQ9UER7 740 aaPredicted RBP8.94□□□□□ -0.98
KCNIP4-201ENST00000359001 ZBTB7BO15156 539 aaPredicted RBP8.93□□□□□ -0.98
KCNIP4-201ENST00000359001 EIF4A2Q14240 407 aaKnown RBP8.93□□□□□ -0.98
KCNIP4-201ENST00000359001 NUCB1Q02818 461 aa8.93□□□□□ -0.98
KCNIP4-201ENST00000359001 LRRC37A3O60309 1634 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 C8orf58Q8NAV2 365 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 RGS12O14924 1447 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 KIF24Q5T7B8 1368 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 FAM83GA6ND36 823 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
KCNIP4-201ENST00000359001 ARHGEF10O15013 1369 aa8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 ANTXR1Q9H6X2 564 aa8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 UPF2Q9HAU5 1272 aaKnown RBP8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 TTC21AQ8NDW8 1320 aa8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 CRB1P82279 1406 aa8.91□□□□□ -0.98
KCNIP4-201ENST00000359001 BECN1Q14457 450 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 CHMP4BQ9H444 224 aaKnown RBP8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 KDRP35968 1356 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 KIAA0232Q92628 1395 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 CEBPAP49715 358 aaPredicted RBP8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 DCTN1Q14203 1278 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 CHD1LQ86WJ1 897 aa8.9□□□□□ -0.98
KCNIP4-201ENST00000359001 ANKARQ7Z5J8 1434 aa8.9□□□□□ -0.99
KCNIP4-201ENST00000359001 CEP170BQ9Y4F5 1589 aaPredicted RBP8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 CHL1O00533 1208 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 SIRT2Q8IXJ6 389 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 SLC26A8Q96RN1 970 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 API5Q9BZZ5 524 aaKnown RBP8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 ATP10DQ9P241 1426 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 SBNO1A3KN83 1393 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 FLT4P35916 1363 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 ELL2O00472 640 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms