RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
VCP-201ENST00000358901 ERC1Q8IUD2 1116 aa16.41■□□□□ 0.22
VCP-201ENST00000358901 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
VCP-201ENST00000358901 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
VCP-201ENST00000358901 ADGRF5Q8IZF2 1346 aa16.41■□□□□ 0.22
VCP-201ENST00000358901 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
VCP-201ENST00000358901 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
VCP-201ENST00000358901 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
VCP-201ENST00000358901 IGHDP01880 384 aa16.4■□□□□ 0.22
VCP-201ENST00000358901 TRIM27P14373 513 aa16.4■□□□□ 0.22
VCP-201ENST00000358901 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
VCP-201ENST00000358901 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
VCP-201ENST00000358901 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
VCP-201ENST00000358901 MAPKBP1O60336 1514 aa16.39■□□□□ 0.21
VCP-201ENST00000358901 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
VCP-201ENST00000358901 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
VCP-201ENST00000358901 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
VCP-201ENST00000358901 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
VCP-201ENST00000358901 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
VCP-201ENST00000358901 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 KRT85P78386 507 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
VCP-201ENST00000358901 MCM10Q7L590 875 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
VCP-201ENST00000358901 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 RAD21O60216 631 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 PDILTQ8N807 584 aa16.38■□□□□ 0.21
VCP-201ENST00000358901 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
VCP-201ENST00000358901 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
VCP-201ENST00000358901 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
VCP-201ENST00000358901 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
VCP-201ENST00000358901 ARGLU1Q9NWB6 273 aaPredicted RBP16.37■□□□□ 0.21
VCP-201ENST00000358901 ATF3P18847 181 aa16.37■□□□□ 0.21
VCP-201ENST00000358901 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
VCP-201ENST00000358901 SMC2O95347 1197 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
VCP-201ENST00000358901 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 STK38Q15208 465 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
VCP-201ENST00000358901 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
VCP-201ENST00000358901 SYCE3A1L190 88 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
VCP-201ENST00000358901 AACSQ86V21 672 aa16.35■□□□□ 0.21
VCP-201ENST00000358901 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
VCP-201ENST00000358901 FYB1O15117 783 aa16.34■□□□□ 0.21
VCP-201ENST00000358901 EMILIN1Q9Y6C2 1016 aa16.34■□□□□ 0.21
VCP-201ENST00000358901 ABCC11Q96J66 1382 aa16.34■□□□□ 0.21
VCP-201ENST00000358901 ANKRD1Q15327 319 aa16.34■□□□□ 0.21
VCP-201ENST00000358901 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
VCP-201ENST00000358901 ME1P48163 572 aa16.33■□□□□ 0.21
VCP-201ENST00000358901 SSFA2P28290 1259 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
VCP-201ENST00000358901 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.2
VCP-201ENST00000358901 PDRG1Q9NUG6 133 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 MYL6BP14649 208 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 NME9Q86XW9 330 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
VCP-201ENST00000358901 F6X3S4 739 aa16.32■□□□□ 0.2
VCP-201ENST00000358901 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
VCP-201ENST00000358901 MX1P20591 662 aa16.32■□□□□ 0.2
VCP-201ENST00000358901 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
VCP-201ENST00000358901 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
VCP-201ENST00000358901 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
VCP-201ENST00000358901 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
VCP-201ENST00000358901 TTLL5Q6EMB2 1281 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 XBP1P17861 261 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 UQCRHLA0A096LP55 91 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 UQCRHP07919 91 aa16.3■□□□□ 0.2
VCP-201ENST00000358901 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
VCP-201ENST00000358901 CASTP20810 708 aaKnown RBP16.29■□□□□ 0.2
VCP-201ENST00000358901 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
VCP-201ENST00000358901 NUP62CLQ9H1M0 184 aa16.29■□□□□ 0.2
VCP-201ENST00000358901 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
VCP-201ENST00000358901 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
VCP-201ENST00000358901 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
VCP-201ENST00000358901 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
VCP-201ENST00000358901 KIF1BPQ96EK5 621 aa16.29■□□□□ 0.2
VCP-201ENST00000358901 IDI1Q13907 227 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 BMP2KLQ5H9B9 411 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 FILIP1Q7Z7B0 1213 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 BTBD11A6QL63 1104 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
VCP-201ENST00000358901 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.2
VCP-201ENST00000358901 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
VCP-201ENST00000358901 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
VCP-201ENST00000358901 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
VCP-201ENST00000358901 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
VCP-201ENST00000358901 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
VCP-201ENST00000358901 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms