RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CCDC30Q5VVM6 783 aa14.97□□□□□ -0.01
COL20A1-201ENST00000358894 EXOC6BQ9Y2D4 811 aa14.97□□□□□ -0.01
COL20A1-201ENST00000358894 K7ELQ4 463 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-201ENST00000358894 NUCB2P80303 420 aa14.97□□□□□ -0.01
COL20A1-201ENST00000358894 GNAI2P04899 355 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 CEBPAP49715 358 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-201ENST00000358894 IL16Q14005 1332 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 NPATQ14207 1427 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 ERVK-7P63135 1459 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.01
COL20A1-201ENST00000358894 GNAI3P08754 354 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-201ENST00000358894 DIAPH3Q9NSV4 1193 aa14.96□□□□□ -0.01
COL20A1-201ENST00000358894 SYAP1Q96A49 352 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-201ENST00000358894 RABEP1Q15276 862 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 MRE11P49959 708 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
COL20A1-201ENST00000358894 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 ABCC1P33527 1531 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
COL20A1-201ENST00000358894 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
COL20A1-201ENST00000358894 ZRSR1Q15695 479 aaKnown RBP14.94□□□□□ -0.02
COL20A1-201ENST00000358894 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
COL20A1-201ENST00000358894 HDAC5Q9UQL6 1122 aa14.94□□□□□ -0.02
COL20A1-201ENST00000358894 HSP90AB2PQ58FF8 381 aa14.94□□□□□ -0.02
COL20A1-201ENST00000358894 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
COL20A1-201ENST00000358894 TRMT2AQ8IZ69 625 aaKnown RBP14.94□□□□□ -0.02
COL20A1-201ENST00000358894 PUS7Q96PZ0 661 aaKnown RBP14.94□□□□□ -0.02
COL20A1-201ENST00000358894 KRT24Q2M2I5 525 aa14.93□□□□□ -0.02
COL20A1-201ENST00000358894 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
COL20A1-201ENST00000358894 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
COL20A1-201ENST00000358894 TRPM1Q7Z4N2 1603 aa14.93□□□□□ -0.02
COL20A1-201ENST00000358894 CHD1O14646 1710 aa14.93□□□□□ -0.02
COL20A1-201ENST00000358894 TBC1D9Q6ZT07 1266 aa14.93□□□□□ -0.02
COL20A1-201ENST00000358894 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
COL20A1-201ENST00000358894 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
COL20A1-201ENST00000358894 NUCB1Q02818 461 aa14.92□□□□□ -0.02
COL20A1-201ENST00000358894 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
COL20A1-201ENST00000358894 TRPM2O94759 1503 aa14.92□□□□□ -0.02
COL20A1-201ENST00000358894 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
COL20A1-201ENST00000358894 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
COL20A1-201ENST00000358894 VAMP4O75379 141 aa14.91□□□□□ -0.02
COL20A1-201ENST00000358894 MAP4K4O95819 1239 aaPredicted RBP14.91□□□□□ -0.02
COL20A1-201ENST00000358894 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
COL20A1-201ENST00000358894 PRPF40AO75400 957 aaKnown RBP14.91□□□□□ -0.02
COL20A1-201ENST00000358894 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
COL20A1-201ENST00000358894 KDM5AP29375 1690 aaKnown RBP14.91□□□□□ -0.02
COL20A1-201ENST00000358894 ERC2O15083 957 aa14.91□□□□□ -0.02
COL20A1-201ENST00000358894 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
COL20A1-201ENST00000358894 ACEP12821 1306 aa14.9□□□□□ -0.02
COL20A1-201ENST00000358894 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
COL20A1-201ENST00000358894 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
COL20A1-201ENST00000358894 CHAF1AQ13111 956 aaPredicted RBP14.9□□□□□ -0.02
COL20A1-201ENST00000358894 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
COL20A1-201ENST00000358894 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
COL20A1-201ENST00000358894 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 AMOTL2Q9Y2J4 779 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 NASPP49321 788 aaPredicted RBP14.89□□□□□ -0.03
COL20A1-201ENST00000358894 RNF214Q8ND24 703 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 SBNO2Q9Y2G9 1366 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 PPIP5K1Q6PFW1 1433 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
COL20A1-201ENST00000358894 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
COL20A1-201ENST00000358894 XPCQ01831 940 aaPredicted RBP14.88□□□□□ -0.03
COL20A1-201ENST00000358894 DRC7Q8IY82 874 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
COL20A1-201ENST00000358894 NEXNQ0ZGT2 675 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
COL20A1-201ENST00000358894 R3HCC1Q9Y3T6 440 aaKnown RBP14.88□□□□□ -0.03
COL20A1-201ENST00000358894 SYNMO15061 1565 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 KIAA2012Q0VF49 1180 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 MEIS3Q99687 375 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
COL20A1-201ENST00000358894 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
COL20A1-201ENST00000358894 TNPO1Q92973 898 aaKnown RBP14.87□□□□□ -0.03
COL20A1-201ENST00000358894 NLRP2Q9NX02 1062 aa14.87□□□□□ -0.03
COL20A1-201ENST00000358894 G3BP1Q13283 466 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL20A1-201ENST00000358894 GORABQ5T7V8 394 aa14.87□□□□□ -0.03
COL20A1-201ENST00000358894 C16orf71Q8IYS4 520 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-201ENST00000358894 CIZ1Q9ULV3 898 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-201ENST00000358894 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-201ENST00000358894 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
COL20A1-201ENST00000358894 RIMS2Q9UQ26 1411 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 ZKSCAN1P17029 563 aaPredicted RBP14.86□□□□□ -0.03
COL20A1-201ENST00000358894 SSFA2P28290 1259 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
COL20A1-201ENST00000358894 CLASRPQ8N2M8 674 aaKnown RBP14.86□□□□□ -0.03
COL20A1-201ENST00000358894 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
COL20A1-201ENST00000358894 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 UHRF1BP1LA0JNW5 1464 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 PLXNC1O60486 1568 aa14.86□□□□□ -0.03
COL20A1-201ENST00000358894 UPF3BQ9BZI7 483 aaKnown RBP14.85□□□□□ -0.03
COL20A1-201ENST00000358894 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms