RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 ACEP12821 1306 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 DLG5Q8TDM6 1919 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 TTC21BQ7Z4L5 1316 aa20.18■□□□□ 0.82
PHTF1-201ENST00000357783 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
PHTF1-201ENST00000357783 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
PHTF1-201ENST00000357783 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
PHTF1-201ENST00000357783 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
PHTF1-201ENST00000357783 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
PHTF1-201ENST00000357783 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
PHTF1-201ENST00000357783 SEC24BO95487 1268 aa20.15■□□□□ 0.82
PHTF1-201ENST00000357783 GNAI1P63096 354 aa20.14■□□□□ 0.82
PHTF1-201ENST00000357783 IFT57Q9NWB7 429 aa20.14■□□□□ 0.82
PHTF1-201ENST00000357783 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
PHTF1-201ENST00000357783 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 PLEKHG3A1L390 1219 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
PHTF1-201ENST00000357783 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 USP6P35125 1406 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 USP19O94966 1318 aa20.13■□□□□ 0.81
PHTF1-201ENST00000357783 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 FER1L4A9Z1Z3 1794 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 VAMP4O75379 141 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
PHTF1-201ENST00000357783 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
PHTF1-201ENST00000357783 SOX12O15370 315 aa20.11■□□□□ 0.81
PHTF1-201ENST00000357783 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
PHTF1-201ENST00000357783 ZNF853P0CG23 659 aa20.11■□□□□ 0.81
PHTF1-201ENST00000357783 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
PHTF1-201ENST00000357783 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
PHTF1-201ENST00000357783 ZBTB40Q9NUA8 1239 aa20.11■□□□□ 0.81
PHTF1-201ENST00000357783 SLIT1O75093 1534 aa20.1■□□□□ 0.81
PHTF1-201ENST00000357783 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
PHTF1-201ENST00000357783 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
PHTF1-201ENST00000357783 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
PHTF1-201ENST00000357783 BRPF1P55201 1214 aaPredicted RBP20.08■□□□□ 0.81
PHTF1-201ENST00000357783 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
PHTF1-201ENST00000357783 NALCNQ8IZF0 1738 aa20.08■□□□□ 0.8
PHTF1-201ENST00000357783 PEAK1Q9H792 1746 aa20.08■□□□□ 0.8
PHTF1-201ENST00000357783 TBX22Q9Y458 520 aa20.07■□□□□ 0.8
PHTF1-201ENST00000357783 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
PHTF1-201ENST00000357783 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
PHTF1-201ENST00000357783 C8orf58Q8NAV2 365 aa20.07■□□□□ 0.8
PHTF1-201ENST00000357783 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
PHTF1-201ENST00000357783 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
PHTF1-201ENST00000357783 THEMISQ8N1K5 641 aaPredicted RBP20.05■□□□□ 0.8
PHTF1-201ENST00000357783 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
PHTF1-201ENST00000357783 SMC5Q8IY18 1101 aa20.04■□□□□ 0.8
PHTF1-201ENST00000357783 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
PHTF1-201ENST00000357783 USP31Q70CQ4 1352 aa20.04■□□□□ 0.8
PHTF1-201ENST00000357783 NGDNQ8NEJ9 315 aaKnown RBP20.03■□□□□ 0.8
PHTF1-201ENST00000357783 ARHGAP45Q92619 1136 aa20.03■□□□□ 0.8
PHTF1-201ENST00000357783 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
PHTF1-201ENST00000357783 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.79
PHTF1-201ENST00000357783 USP35Q9P2H5 1018 aa20.02■□□□□ 0.79
PHTF1-201ENST00000357783 RGPD1P0DJD0 1748 aa20.01■□□□□ 0.79
PHTF1-201ENST00000357783 MAP3K19Q56UN5 1328 aa20.01■□□□□ 0.79
PHTF1-201ENST00000357783 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
PHTF1-201ENST00000357783 MCM10Q7L590 875 aa20.01■□□□□ 0.79
PHTF1-201ENST00000357783 PIK3R4Q99570 1358 aa20.01■□□□□ 0.79
PHTF1-201ENST00000357783 ZBTB7BO15156 539 aaPredicted RBP20■□□□□ 0.79
PHTF1-201ENST00000357783 FMN2Q9NZ56 1722 aa20■□□□□ 0.79
PHTF1-201ENST00000357783 ABCC4O15439 1325 aa19.99■□□□□ 0.79
PHTF1-201ENST00000357783 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
PHTF1-201ENST00000357783 TBC1D32Q96NH3 1257 aa19.98■□□□□ 0.79
PHTF1-201ENST00000357783 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
PHTF1-201ENST00000357783 LNPKQ9C0E8 428 aa19.98■□□□□ 0.79
PHTF1-201ENST00000357783 KCNA6P17658 529 aa19.97■□□□□ 0.79
PHTF1-201ENST00000357783 NUCB1Q02818 461 aa19.97■□□□□ 0.79
PHTF1-201ENST00000357783 NFKBIBQ15653 356 aa19.97■□□□□ 0.79
PHTF1-201ENST00000357783 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
PHTF1-201ENST00000357783 CHMP4BQ9H444 224 aaKnown RBP19.96■□□□□ 0.79
PHTF1-201ENST00000357783 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
PHTF1-201ENST00000357783 RIMS1Q86UR5 1692 aaKnown RBP19.96■□□□□ 0.79
PHTF1-201ENST00000357783 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
PHTF1-201ENST00000357783 SBNO1A3KN83 1393 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 ARHGEF10O15013 1369 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 FLT4P35916 1363 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 BECN1Q14457 450 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 CHL1O00533 1208 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 AMPHP49418 695 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 CHD1LQ86WJ1 897 aa19.95■□□□□ 0.78
PHTF1-201ENST00000357783 FOXO3O43524 673 aa19.93■□□□□ 0.78
PHTF1-201ENST00000357783 MFAP1P55081 439 aaKnown RBP19.93■□□□□ 0.78
PHTF1-201ENST00000357783 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
PHTF1-201ENST00000357783 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
PHTF1-201ENST00000357783 NLRP6P59044 892 aa19.92■□□□□ 0.78
PHTF1-201ENST00000357783 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
PHTF1-201ENST00000357783 MTHFSDQ2M296 383 aaKnown RBP19.91■□□□□ 0.78
PHTF1-201ENST00000357783 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
PHTF1-201ENST00000357783 MIS18AQ9NYP9 233 aa19.91■□□□□ 0.78
PHTF1-201ENST00000357783 CRB1P82279 1406 aa19.91■□□□□ 0.78
PHTF1-201ENST00000357783 ANKARQ7Z5J8 1434 aa19.91■□□□□ 0.78
PHTF1-201ENST00000357783 EYA1Q99502 592 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms