RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SKOR2Q2VWA4 1001 aaPredicted RBP22.12■■□□□ 1.13
RTN4-204ENST00000357732 MRPL50Q8N5N7 158 aaKnown RBP22.12■■□□□ 1.13
RTN4-204ENST00000357732 ABCC4O15439 1325 aa22.12■■□□□ 1.13
RTN4-204ENST00000357732 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
RTN4-204ENST00000357732 SPRYD3Q8NCJ5 442 aa22.12■■□□□ 1.13
RTN4-204ENST00000357732 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.12■■□□□ 1.13
RTN4-204ENST00000357732 VAMP4O75379 141 aa22.11■■□□□ 1.13
RTN4-204ENST00000357732 FBLN1P23142 703 aa22.11■■□□□ 1.13
RTN4-204ENST00000357732 POLKQ9UBT6 870 aa22.11■■□□□ 1.13
RTN4-204ENST00000357732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.1■■□□□ 1.131e-7■■■□□ 14.8
RTN4-204ENST00000357732 AATKQ6ZMQ8 1374 aa22.1■■□□□ 1.13
RTN4-204ENST00000357732 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
RTN4-204ENST00000357732 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
RTN4-204ENST00000357732 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
RTN4-204ENST00000357732 RAB3GAP1Q15042 981 aa22.09■■□□□ 1.13
RTN4-204ENST00000357732 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.13
RTN4-204ENST00000357732 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
RTN4-204ENST00000357732 RRAGDQ9NQL2 400 aaPredicted RBP22.07■■□□□ 1.12
RTN4-204ENST00000357732 API5Q9BZZ5 524 aaKnown RBP22.07■■□□□ 1.12
RTN4-204ENST00000357732 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
RTN4-204ENST00000357732 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
RTN4-204ENST00000357732 KIF2CQ99661 725 aa22.06■■□□□ 1.12
RTN4-204ENST00000357732 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
RTN4-204ENST00000357732 SETD1AO15047 1707 aaKnown RBP22.05■■□□□ 1.12
RTN4-204ENST00000357732 CLCN1P35523 988 aa22.05■■□□□ 1.12
RTN4-204ENST00000357732 TNPO1Q92973 898 aaKnown RBP22.05■■□□□ 1.12
RTN4-204ENST00000357732 GRPEL1Q9HAV7 217 aa22.05■■□□□ 1.12
RTN4-204ENST00000357732 K7ELQ4 463 aaPredicted RBP22.04■■□□□ 1.12
RTN4-204ENST00000357732 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
RTN4-204ENST00000357732 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
RTN4-204ENST00000357732 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
RTN4-204ENST00000357732 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
RTN4-204ENST00000357732 CLEC17AQ6ZS10 378 aa22.04■■□□□ 1.12
RTN4-204ENST00000357732 GZF1Q9H116 711 aaPredicted RBP22.04■■□□□ 1.12
RTN4-204ENST00000357732 CDC45O75419 566 aa22.03■■□□□ 1.12
RTN4-204ENST00000357732 IL13P35225 146 aa22.03■■□□□ 1.12
RTN4-204ENST00000357732 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
RTN4-204ENST00000357732 TBC1D9Q6ZT07 1266 aa22.03■■□□□ 1.12
RTN4-204ENST00000357732 A2ML1A8K2U0 1454 aa22.02■■□□□ 1.12
RTN4-204ENST00000357732 FAM69CQ0P6D2 419 aa22.01■■□□□ 1.11
RTN4-204ENST00000357732 TWISTNBQ3B726 338 aaPredicted RBP22.01■■□□□ 1.11
RTN4-204ENST00000357732 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
RTN4-204ENST00000357732 MBIPQ9NS73 344 aa22.01■■□□□ 1.11
RTN4-204ENST00000357732 HMOX1P09601 288 aa22.01■■□□□ 1.11
RTN4-204ENST00000357732 PRKCSHP14314 528 aaPredicted RBP22.01■■□□□ 1.11
RTN4-204ENST00000357732 RIMS2Q9UQ26 1411 aa22■■□□□ 1.11
RTN4-204ENST00000357732 DLG5Q8TDM6 1919 aa22■■□□□ 1.11
RTN4-204ENST00000357732 MON2Q7Z3U7 1717 aa21.99■■□□□ 1.11
RTN4-204ENST00000357732 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
RTN4-204ENST00000357732 AGLP35573 1532 aa21.99■■□□□ 1.11
RTN4-204ENST00000357732 IBTKQ9P2D0 1353 aaPredicted RBP21.99■■□□□ 1.11
RTN4-204ENST00000357732 HSP90AA1P07900 732 aaKnown RBP21.99■■□□□ 1.11
RTN4-204ENST00000357732 GOLGA6L22H0YM25 854 aa21.98■■□□□ 1.11
RTN4-204ENST00000357732 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
RTN4-204ENST00000357732 PANK2Q9BZ23 570 aa21.98■■□□□ 1.11
RTN4-204ENST00000357732 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
RTN4-204ENST00000357732 SPATA31D1Q6ZQQ2 1576 aa21.98■■□□□ 1.11
RTN4-204ENST00000357732 TSPYL6Q8N831 410 aa21.98■■□□□ 1.11
RTN4-204ENST00000357732 NRKQ7Z2Y5 1582 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 RABEP1Q15276 862 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 NME9Q86XW9 330 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 DCTPP1Q9H773 170 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 KNDC1Q76NI1 1749 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 MLECQ14165 292 aa21.96■■□□□ 1.11
RTN4-204ENST00000357732 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
RTN4-204ENST00000357732 WASLO00401 505 aaPredicted RBP21.94■■□□□ 1.1
RTN4-204ENST00000357732 SIRT1Q96EB6 747 aa21.94■■□□□ 1.1
RTN4-204ENST00000357732 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
RTN4-204ENST00000357732 AKAP12Q02952 1782 aa21.93■■□□□ 1.1
RTN4-204ENST00000357732 C3P01024 1663 aa21.93■■□□□ 1.1
RTN4-204ENST00000357732 RPAP2Q8IXW5 612 aaPredicted RBP21.92■■□□□ 1.1
RTN4-204ENST00000357732 PLEKHM2Q8IWE5 1019 aa21.92■■□□□ 1.1
RTN4-204ENST00000357732 COG3Q96JB2 828 aa21.92■■□□□ 1.1
RTN4-204ENST00000357732 NCKAP5LQ9HCH0 1330 aa21.92■■□□□ 1.1
RTN4-204ENST00000357732 METP08581 1390 aa21.92■■□□□ 1.1
RTN4-204ENST00000357732 TTC22Q5TAA0 569 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 KIAA0232Q92628 1395 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 TXNDC2Q86VQ3 553 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 C8orf58Q8NAV2 365 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 ARXQ96QS3 562 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 TECPR2O15040 1411 aa21.91■■□□□ 1.1
RTN4-204ENST00000357732 CD2BP2O95400 341 aaKnown RBP21.9■■□□□ 1.1
RTN4-204ENST00000357732 ITSN1Q15811 1721 aa21.9■■□□□ 1.1
RTN4-204ENST00000357732 ANKRD44Q8N8A2 993 aa21.9■■□□□ 1.1
RTN4-204ENST00000357732 GSPT1P15170 499 aaKnown RBP21.9■■□□□ 1.1
RTN4-204ENST00000357732 NUCB2P80303 420 aa21.9■■□□□ 1.1
RTN4-204ENST00000357732 KLHL40Q2TBA0 621 aa21.9■■□□□ 1.1
RTN4-204ENST00000357732 TSPOAP1O95153 1857 aa21.9■■□□□ 1.1
RTN4-204ENST00000357732 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.1
RTN4-204ENST00000357732 ELL2O00472 640 aaPredicted RBP21.89■■□□□ 1.1
RTN4-204ENST00000357732 ATP10DQ9P241 1426 aa21.89■■□□□ 1.09
RTN4-204ENST00000357732 PTPRCP08575 1304 aa21.89■■□□□ 1.09
RTN4-204ENST00000357732 ESPNB1AK53 854 aa21.89■■□□□ 1.09
RTN4-204ENST00000357732 CASC1Q6TDU7 716 aa21.89■■□□□ 1.09
RTN4-204ENST00000357732 RRS1Q15050 365 aaKnown RBP21.88■■□□□ 1.09
RTN4-204ENST00000357732 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTN4-204ENST00000357732 NUDT16Q96DE0 195 aaKnown RBP21.88■■□□□ 1.09
RTN4-204ENST00000357732 TRIM44Q96DX7 344 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms