RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TERF1P54274 439 aa13.38□□□□□ -0.27
CAPN3-205ENST00000357568 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
CAPN3-205ENST00000357568 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-205ENST00000357568 GBP4Q96PP9 640 aa13.37□□□□□ -0.27
CAPN3-205ENST00000357568 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
CAPN3-205ENST00000357568 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
CAPN3-205ENST00000357568 RLBP1P12271 317 aa13.36□□□□□ -0.27
CAPN3-205ENST00000357568 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
CAPN3-205ENST00000357568 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
CAPN3-205ENST00000357568 CARD14Q9BXL6 1004 aa13.36□□□□□ -0.27
CAPN3-205ENST00000357568 NSD2O96028 1365 aa13.35□□□□□ -0.27
CAPN3-205ENST00000357568 KIF16BQ96L93 1317 aa13.35□□□□□ -0.27
CAPN3-205ENST00000357568 CLEC17AQ6ZS10 378 aa13.35□□□□□ -0.27
CAPN3-205ENST00000357568 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-205ENST00000357568 STK26Q9P289 416 aa13.35□□□□□ -0.27
CAPN3-205ENST00000357568 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
CAPN3-205ENST00000357568 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-205ENST00000357568 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
CAPN3-205ENST00000357568 TRAK1Q9UPV9 953 aa13.34□□□□□ -0.27
CAPN3-205ENST00000357568 QRICH2Q9H0J4 1663 aa13.34□□□□□ -0.27
CAPN3-205ENST00000357568 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
CAPN3-205ENST00000357568 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
CAPN3-205ENST00000357568 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
CAPN3-205ENST00000357568 TCP11L2Q8N4U5 519 aa13.33□□□□□ -0.28
CAPN3-205ENST00000357568 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
CAPN3-205ENST00000357568 DDX19BQ9UMR2 479 aa13.33□□□□□ -0.28
CAPN3-205ENST00000357568 NALCNQ8IZF0 1738 aa13.33□□□□□ -0.28
CAPN3-205ENST00000357568 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-205ENST00000357568 ADGRL3Q9HAR2 1447 aa13.32□□□□□ -0.28
CAPN3-205ENST00000357568 DCCP43146 1447 aa13.32□□□□□ -0.28
CAPN3-205ENST00000357568 HS1BP3Q53T59 392 aa13.32□□□□□ -0.28
CAPN3-205ENST00000357568 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-205ENST00000357568 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
CAPN3-205ENST00000357568 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 IL16Q14005 1332 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 MFAP1P55081 439 aaKnown RBP13.31□□□□□ -0.28
CAPN3-205ENST00000357568 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
CAPN3-205ENST00000357568 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
CAPN3-205ENST00000357568 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
CAPN3-205ENST00000357568 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
CAPN3-205ENST00000357568 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
CAPN3-205ENST00000357568 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
CAPN3-205ENST00000357568 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
CAPN3-205ENST00000357568 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
CAPN3-205ENST00000357568 MSH6P52701 1360 aa13.28□□□□□ -0.28
CAPN3-205ENST00000357568 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
CAPN3-205ENST00000357568 OFD1O75665 1012 aa13.27□□□□□ -0.28
CAPN3-205ENST00000357568 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.28
CAPN3-205ENST00000357568 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.28
CAPN3-205ENST00000357568 C19orf44Q9H6X5 657 aa13.27□□□□□ -0.28
CAPN3-205ENST00000357568 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-205ENST00000357568 NUCB1Q02818 461 aa13.27□□□□□ -0.29
CAPN3-205ENST00000357568 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
CAPN3-205ENST00000357568 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
CAPN3-205ENST00000357568 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
CAPN3-205ENST00000357568 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
CAPN3-205ENST00000357568 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
CAPN3-205ENST00000357568 ANP32BQ92688 251 aaKnown RBP13.26□□□□□ -0.29
CAPN3-205ENST00000357568 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
CAPN3-205ENST00000357568 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
CAPN3-205ENST00000357568 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
CAPN3-205ENST00000357568 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
CAPN3-205ENST00000357568 ANKARQ7Z5J8 1434 aa13.25□□□□□ -0.29
CAPN3-205ENST00000357568 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-205ENST00000357568 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
CAPN3-205ENST00000357568 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
CAPN3-205ENST00000357568 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
CAPN3-205ENST00000357568 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 ZNF445P59923 1031 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 EVC2Q86UK5 1308 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
CAPN3-205ENST00000357568 TRIM27P14373 513 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
CAPN3-205ENST00000357568 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
CAPN3-205ENST00000357568 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-205ENST00000357568 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-205ENST00000357568 ARXQ96QS3 562 aa13.23□□□□□ -0.29
CAPN3-205ENST00000357568 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-205ENST00000357568 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-205ENST00000357568 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
CAPN3-205ENST00000357568 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
CAPN3-205ENST00000357568 ATF3P18847 181 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 MCM5P33992 734 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPN3-205ENST00000357568 KIAA1211Q6ZU35 1233 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 KIF2CQ99661 725 aa13.22□□□□□ -0.29
CAPN3-205ENST00000357568 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
CAPN3-205ENST00000357568 ANKRD36BQ8N2N9 1353 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 FGD1P98174 961 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 MST1RQ04912 1400 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms