RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
KDM1A-201ENST00000356634 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
KDM1A-201ENST00000356634 CFAP74Q9C0B2 1584 aa21.81■■□□□ 1.08
KDM1A-201ENST00000356634 MYO3AQ8NEV4 1616 aa21.8■■□□□ 1.08
KDM1A-201ENST00000356634 ATAD2Q6PL18 1390 aa21.8■■□□□ 1.08
KDM1A-201ENST00000356634 IBTKQ9P2D0 1353 aaPredicted RBP21.8■■□□□ 1.08
KDM1A-201ENST00000356634 SYCE3A1L190 88 aa21.8■■□□□ 1.08
KDM1A-201ENST00000356634 FYB1O15117 783 aa21.79■■□□□ 1.08
KDM1A-201ENST00000356634 NOL7Q9UMY1 257 aaKnown RBP21.79■■□□□ 1.08
KDM1A-201ENST00000356634 MINK1Q8N4C8 1332 aaPredicted RBP21.79■■□□□ 1.08
KDM1A-201ENST00000356634 DEPDC5O75140 1603 aa21.79■■□□□ 1.08
KDM1A-201ENST00000356634 CLEC17AQ6ZS10 378 aa21.79■■□□□ 1.08
KDM1A-201ENST00000356634 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
KDM1A-201ENST00000356634 MRPL50Q8N5N7 158 aaKnown RBP21.78■■□□□ 1.08
KDM1A-201ENST00000356634 VAMP4O75379 141 aa21.77■■□□□ 1.08
KDM1A-201ENST00000356634 PTMAP06454 111 aaKnown RBP21.77■■□□□ 1.08
KDM1A-201ENST00000356634 PLEKHM2Q8IWE5 1019 aa21.77■■□□□ 1.08
KDM1A-201ENST00000356634 ST18O60284 1047 aa21.77■■□□□ 1.07
KDM1A-201ENST00000356634 GPT2Q8TD30 523 aa21.77■■□□□ 1.07
KDM1A-201ENST00000356634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.072e-6■■■□□ 14.8
KDM1A-201ENST00000356634 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
KDM1A-201ENST00000356634 IDI1Q13907 227 aa21.76■■□□□ 1.07
KDM1A-201ENST00000356634 TERF2IPQ9NYB0 399 aa21.76■■□□□ 1.07
KDM1A-201ENST00000356634 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
KDM1A-201ENST00000356634 OTUD7AQ8TE49 926 aaPredicted RBP21.75■■□□□ 1.07
KDM1A-201ENST00000356634 FOXD4L6Q3SYB3 417 aaPredicted RBP21.75■■□□□ 1.07
KDM1A-201ENST00000356634 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
KDM1A-201ENST00000356634 FOXD4L3Q6VB84 417 aaPredicted RBP21.75■■□□□ 1.07
KDM1A-201ENST00000356634 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
KDM1A-201ENST00000356634 MPNDQ8N594 471 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 PHACTR3Q96KR7 559 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 USP26Q9BXU7 913 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 TPRNQ4KMQ1 711 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.74■■□□□ 1.07
KDM1A-201ENST00000356634 ZKSCAN5Q9Y2L8 839 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 TTC22Q5TAA0 569 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 CASC1Q6TDU7 716 aa21.74■■□□□ 1.07
KDM1A-201ENST00000356634 TWISTNBQ3B726 338 aaPredicted RBP21.73■■□□□ 1.07
KDM1A-201ENST00000356634 HS1BP3Q53T59 392 aa21.73■■□□□ 1.07
KDM1A-201ENST00000356634 DNTTIP2Q5QJE6 756 aaKnown RBP21.73■■□□□ 1.07
KDM1A-201ENST00000356634 NOL8Q76FK4 1167 aaKnown RBP21.73■■□□□ 1.07
KDM1A-201ENST00000356634 TMEM63CQ9P1W3 806 aa21.73■■□□□ 1.07
KDM1A-201ENST00000356634 VWDEQ8N2E2 1590 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 SETBP1Q9Y6X0 1596 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 SMARCA5O60264 1052 aaPredicted RBP21.72■■□□□ 1.07
KDM1A-201ENST00000356634 FCHSD2O94868 740 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 NSFL1CQ9UNZ2 370 aaKnown RBP21.72■■□□□ 1.07
KDM1A-201ENST00000356634 ZNF500O60304 480 aaPredicted RBP21.72■■□□□ 1.07
KDM1A-201ENST00000356634 NPATQ14207 1427 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 USP32Q8NFA0 1604 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 ZNF428Q96B54 188 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
KDM1A-201ENST00000356634 TULP4Q9NRJ4 1543 aa21.71■■□□□ 1.07
KDM1A-201ENST00000356634 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
KDM1A-201ENST00000356634 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
KDM1A-201ENST00000356634 ADGRB1O14514 1584 aa21.71■■□□□ 1.07
KDM1A-201ENST00000356634 PDLIM2Q96JY6 352 aa21.71■■□□□ 1.07
KDM1A-201ENST00000356634 MBIPQ9NS73 344 aa21.71■■□□□ 1.07
KDM1A-201ENST00000356634 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
KDM1A-201ENST00000356634 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
KDM1A-201ENST00000356634 TERF1P54274 439 aa21.7■■□□□ 1.06
KDM1A-201ENST00000356634 MAP7D2Q96T17 732 aa21.7■■□□□ 1.06
KDM1A-201ENST00000356634 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
KDM1A-201ENST00000356634 MED14O60244 1454 aa21.7■■□□□ 1.06
KDM1A-201ENST00000356634 SDSP20132 328 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 GNAI1P63096 354 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 CSPP1Q1MSJ5 1256 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 LRSAM1Q6UWE0 723 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 NEURL4Q96JN8 1562 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
KDM1A-201ENST00000356634 CCDC39Q9UFE4 941 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 C8orf58Q8NAV2 365 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 ZDHHC9Q9Y397 364 aa21.69■■□□□ 1.06
KDM1A-201ENST00000356634 ZC3H13Q5T200 1668 aaKnown RBP21.68■■□□□ 1.06
KDM1A-201ENST00000356634 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
KDM1A-201ENST00000356634 API5Q9BZZ5 524 aaKnown RBP21.68■■□□□ 1.06
KDM1A-201ENST00000356634 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
KDM1A-201ENST00000356634 ADGRB3O60242 1522 aa21.68■■□□□ 1.06
KDM1A-201ENST00000356634 CFAP44Q96MT7 982 aa21.67■■□□□ 1.06
KDM1A-201ENST00000356634 PRDM10Q9NQV6 1147 aa21.67■■□□□ 1.06
KDM1A-201ENST00000356634 ABCC4O15439 1325 aa21.67■■□□□ 1.06
KDM1A-201ENST00000356634 COL3A1P02461 1466 aaPredicted RBP21.67■■□□□ 1.06
KDM1A-201ENST00000356634 PUS7Q96PZ0 661 aaKnown RBP21.66■■□□□ 1.06
KDM1A-201ENST00000356634 DCTPP1Q9H773 170 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 NEK4P51957 841 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 BRPF1P55201 1214 aaPredicted RBP21.66■■□□□ 1.06
KDM1A-201ENST00000356634 DCTN1Q14203 1278 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
KDM1A-201ENST00000356634 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
KDM1A-201ENST00000356634 REC8O95072 547 aa21.65■■□□□ 1.06
KDM1A-201ENST00000356634 INO80Q9ULG1 1556 aaPredicted RBP21.64■■□□□ 1.06
KDM1A-201ENST00000356634 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.06
KDM1A-201ENST00000356634 GLI2P10070 1586 aa21.64■■□□□ 1.05
KDM1A-201ENST00000356634 SASS6Q6UVJ0 657 aa21.64■■□□□ 1.05
KDM1A-201ENST00000356634 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
KDM1A-201ENST00000356634 DYNC1I1O14576 645 aa21.63■■□□□ 1.05
KDM1A-201ENST00000356634 IFT57Q9NWB7 429 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms