RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 TECPR2O15040 1411 aa17.94■□□□□ 0.46
LSS-201ENST00000356396 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
LSS-201ENST00000356396 ZNF335Q9H4Z2 1342 aaPredicted RBP17.94■□□□□ 0.46
LSS-201ENST00000356396 MTHFSDQ2M296 383 aaKnown RBP17.93■□□□□ 0.46
LSS-201ENST00000356396 NINLQ9Y2I6 1382 aa17.93■□□□□ 0.46
LSS-201ENST00000356396 LRRC7Q96NW7 1537 aa17.93■□□□□ 0.46
LSS-201ENST00000356396 FCHSD2O94868 740 aa17.93■□□□□ 0.46
LSS-201ENST00000356396 DIP2AQ14689 1571 aa17.92■□□□□ 0.46
LSS-201ENST00000356396 SLIT1O75093 1534 aa17.92■□□□□ 0.46
LSS-201ENST00000356396 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
LSS-201ENST00000356396 AXIN2Q9Y2T1 843 aa17.92■□□□□ 0.46
LSS-201ENST00000356396 NFE2L2Q16236 605 aa17.91■□□□□ 0.46
LSS-201ENST00000356396 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
LSS-201ENST00000356396 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
LSS-201ENST00000356396 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
LSS-201ENST00000356396 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
LSS-201ENST00000356396 FTSJ3Q8IY81 847 aaKnown RBP17.9■□□□□ 0.46
LSS-201ENST00000356396 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
LSS-201ENST00000356396 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 TRIM27P14373 513 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
LSS-201ENST00000356396 MSH5O43196 834 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 HOXC9P31274 260 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 SIRT1Q96EB6 747 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
LSS-201ENST00000356396 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
LSS-201ENST00000356396 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
LSS-201ENST00000356396 APBB1O00213 710 aa17.86■□□□□ 0.45
LSS-201ENST00000356396 ANXA1P04083 346 aa17.86■□□□□ 0.45
LSS-201ENST00000356396 TMEM57Q8N5G2 664 aa17.86■□□□□ 0.45
LSS-201ENST00000356396 ATF3P18847 181 aa17.85■□□□□ 0.45
LSS-201ENST00000356396 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.85■□□□□ 0.45
LSS-201ENST00000356396 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
LSS-201ENST00000356396 GCP02774 474 aa17.84■□□□□ 0.45
LSS-201ENST00000356396 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
LSS-201ENST00000356396 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.45
LSS-201ENST00000356396 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.45
LSS-201ENST00000356396 F6X3S4 739 aa17.83■□□□□ 0.45
LSS-201ENST00000356396 KCNQ3O43525 872 aa17.83■□□□□ 0.44
LSS-201ENST00000356396 TWISTNBQ3B726 338 aaPredicted RBP17.83■□□□□ 0.44
LSS-201ENST00000356396 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
LSS-201ENST00000356396 ADAMTSL3P82987 1691 aa17.82■□□□□ 0.44
LSS-201ENST00000356396 PEAK1Q9H792 1746 aa17.82■□□□□ 0.44
LSS-201ENST00000356396 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
LSS-201ENST00000356396 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
LSS-201ENST00000356396 UTRNP46939 3433 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 VAMP4O75379 141 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 G2E3Q7L622 706 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
LSS-201ENST00000356396 DZIP1LQ8IYY4 767 aaKnown RBP17.8■□□□□ 0.44
LSS-201ENST00000356396 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
LSS-201ENST00000356396 PRAMEF22A3QJZ6 481 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 C19orf44Q9H6X5 657 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
LSS-201ENST00000356396 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
LSS-201ENST00000356396 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
LSS-201ENST00000356396 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
LSS-201ENST00000356396 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.44
LSS-201ENST00000356396 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
LSS-201ENST00000356396 EP400Q96L91 3159 aa17.76■□□□□ 0.43
LSS-201ENST00000356396 PDE4AP27815 886 aa17.76■□□□□ 0.43
LSS-201ENST00000356396 FLT4P35916 1363 aa17.76■□□□□ 0.43
LSS-201ENST00000356396 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
LSS-201ENST00000356396 MON2Q7Z3U7 1717 aa17.76■□□□□ 0.43
LSS-201ENST00000356396 KNDC1Q76NI1 1749 aa17.75■□□□□ 0.43
LSS-201ENST00000356396 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
LSS-201ENST00000356396 PIK3C2AO00443 1686 aa17.75■□□□□ 0.43
LSS-201ENST00000356396 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
LSS-201ENST00000356396 MYT1Q01538 1121 aa17.74■□□□□ 0.43
LSS-201ENST00000356396 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
LSS-201ENST00000356396 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
LSS-201ENST00000356396 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
LSS-201ENST00000356396 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
LSS-201ENST00000356396 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
LSS-201ENST00000356396 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 AKAP12Q02952 1782 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 A0A0G2JS52 829 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 SEC24BO95487 1268 aa17.73■□□□□ 0.43
LSS-201ENST00000356396 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
LSS-201ENST00000356396 GNAI1P63096 354 aa17.72■□□□□ 0.43
LSS-201ENST00000356396 ANKRD26Q9UPS8 1709 aa17.72■□□□□ 0.43
LSS-201ENST00000356396 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
LSS-201ENST00000356396 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
LSS-201ENST00000356396 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms