RNA–Protein interactions for RNA: ENST00000355867.8

SVIL-201, Transcript of supervillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SVIL, Length 7,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-201ENST00000355867 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
SVIL-201ENST00000355867 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
SVIL-201ENST00000355867 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
SVIL-201ENST00000355867 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
SVIL-201ENST00000355867 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
SVIL-201ENST00000355867 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
SVIL-201ENST00000355867 CCDC148Q8NFR7 591 aa12.81□□□□□ -0.36
SVIL-201ENST00000355867 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
SVIL-201ENST00000355867 PDCP20941 246 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 CA8P35219 290 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 CBFA2T2O43439 604 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 HOOK3Q86VS8 718 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 TRAK2O60296 914 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
SVIL-201ENST00000355867 IFFO1Q0D2I5 559 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 NOL7Q9UMY1 257 aaKnown RBP12.79□□□□□ -0.36
SVIL-201ENST00000355867 CDC45O75419 566 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 CCDC57Q2TAC2 916 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 MACROD2A1Z1Q3 448 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 FERP16591 822 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 NEK4P51957 841 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 HIP1O00291 1037 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
SVIL-201ENST00000355867 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
SVIL-201ENST00000355867 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
SVIL-201ENST00000355867 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 TNNT1P13805 278 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 RNF187Q5TA31 235 aaPredicted RBP12.78□□□□□ -0.36
SVIL-201ENST00000355867 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
SVIL-201ENST00000355867 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
SVIL-201ENST00000355867 CTNNA2P26232 953 aa12.77□□□□□ -0.36
SVIL-201ENST00000355867 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.36
SVIL-201ENST00000355867 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.36
SVIL-201ENST00000355867 TIGD1Q96MW7 591 aa12.77□□□□□ -0.37
SVIL-201ENST00000355867 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.37
SVIL-201ENST00000355867 GPATCH11Q8N954 259 aa12.77□□□□□ -0.37
SVIL-201ENST00000355867 DNA2P51530 1060 aa12.77□□□□□ -0.37
SVIL-201ENST00000355867 CBX1P83916 185 aa12.77□□□□□ -0.37
SVIL-201ENST00000355867 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
SVIL-201ENST00000355867 MYZAPP0CAP1 466 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 STRN4Q9NRL3 753 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 UQCRHP07919 91 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
SVIL-201ENST00000355867 MBD3O95983 291 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 CCDC175P0C221 793 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
SVIL-201ENST00000355867 TNIP1Q15025 636 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 SIL1Q9H173 461 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
SVIL-201ENST00000355867 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
SVIL-201ENST00000355867 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
SVIL-201ENST00000355867 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
SVIL-201ENST00000355867 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
SVIL-201ENST00000355867 LIG1P18858 919 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 SPA17Q15506 151 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 TDO2P48775 406 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 CASQ1P31415 396 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 LMAN1P49257 510 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 IPO4Q8TEX9 1081 aaKnown RBP12.74□□□□□ -0.37
SVIL-201ENST00000355867 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 CARMIL2Q6F5E8 1435 aa12.74□□□□□ -0.37
SVIL-201ENST00000355867 GNAI1P63096 354 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
SVIL-201ENST00000355867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.73□□□□□ -0.37
SVIL-201ENST00000355867 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
SVIL-201ENST00000355867 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 TSNARE1Q96NA8 513 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 PODXL2Q9NZ53 605 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 CYP46A1Q9Y6A2 500 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 ZNF354CQ86Y25 554 aa12.73□□□□□ -0.37
SVIL-201ENST00000355867 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 L3MBTL2Q969R5 705 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
SVIL-201ENST00000355867 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
SVIL-201ENST00000355867 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms