RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 LTN1O94822 1766 aa29.85■■■□□ 2.37
SCAMP3-202ENST00000355379 FOXO3O43524 673 aa29.85■■■□□ 2.37
SCAMP3-202ENST00000355379 NFAT5O94916 1531 aa29.85■■■□□ 2.37
SCAMP3-202ENST00000355379 HMOX1P09601 288 aa29.85■■■□□ 2.37
SCAMP3-202ENST00000355379 HSP90AB2PQ58FF8 381 aa29.85■■■□□ 2.37
SCAMP3-202ENST00000355379 PHRF1Q9P1Y6 1649 aaKnown RBP29.84■■■□□ 2.37
SCAMP3-202ENST00000355379 TRIM35Q9UPQ4 493 aa29.84■■■□□ 2.37
SCAMP3-202ENST00000355379 RTL1A6NKG5 1358 aa29.83■■■□□ 2.37
SCAMP3-202ENST00000355379 IL16Q14005 1332 aa29.83■■■□□ 2.37
SCAMP3-202ENST00000355379 SOX12O15370 315 aa29.83■■■□□ 2.37
SCAMP3-202ENST00000355379 NUTM2GQ5VZR2 741 aa29.83■■■□□ 2.37
SCAMP3-202ENST00000355379 SLIT3O75094 1523 aa29.83■■■□□ 2.37
SCAMP3-202ENST00000355379 AMPHP49418 695 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 RIPK4P57078 832 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 KRT28Q7Z3Y7 464 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 PPP4R2Q9NY27 417 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 ALS2Q96Q42 1657 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 ARHGEF10O15013 1369 aa29.82■■■□□ 2.36
SCAMP3-202ENST00000355379 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
SCAMP3-202ENST00000355379 KCNH5Q8NCM2 988 aa29.81■■■□□ 2.36
SCAMP3-202ENST00000355379 DLG5Q8TDM6 1919 aa29.8■■■□□ 2.36
SCAMP3-202ENST00000355379 MYH16Q9H6N6 1097 aa29.8■■■□□ 2.36
SCAMP3-202ENST00000355379 PHACTR3Q96KR7 559 aa29.78■■■□□ 2.36
SCAMP3-202ENST00000355379 HOXC9P31274 260 aa29.77■■■□□ 2.36
SCAMP3-202ENST00000355379 ZNF335Q9H4Z2 1342 aaPredicted RBP29.77■■■□□ 2.36
SCAMP3-202ENST00000355379 SULT6B1Q6IMI4 303 aa29.76■■■□□ 2.35
SCAMP3-202ENST00000355379 USP19O94966 1318 aa29.75■■■□□ 2.35
SCAMP3-202ENST00000355379 KDRP35968 1356 aa29.72■■■□□ 2.35
SCAMP3-202ENST00000355379 XPCQ01831 940 aaPredicted RBP29.72■■■□□ 2.35
SCAMP3-202ENST00000355379 LMOD3Q0VAK6 560 aa29.72■■■□□ 2.35
SCAMP3-202ENST00000355379 NPHP3Q7Z494 1330 aa29.72■■■□□ 2.35
SCAMP3-202ENST00000355379 IGSF1Q8N6C5 1336 aa29.72■■■□□ 2.35
SCAMP3-202ENST00000355379 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.71■■■□□ 2.35
SCAMP3-202ENST00000355379 IP6K1Q92551 441 aa29.71■■■□□ 2.35
SCAMP3-202ENST00000355379 CALD1Q05682 793 aaKnown RBP29.71■■■□□ 2.35
SCAMP3-202ENST00000355379 AEBP1Q8IUX7 1158 aa29.7■■■□□ 2.34
SCAMP3-202ENST00000355379 PELP1Q8IZL8 1130 aaKnown RBP29.7■■■□□ 2.34
SCAMP3-202ENST00000355379 CT47B1P0C2W7 299 aaPredicted RBP29.69■■■□□ 2.34
SCAMP3-202ENST00000355379 PXDNQ92626 1479 aa29.67■■■□□ 2.34
SCAMP3-202ENST00000355379 GCP02774 474 aa29.67■■■□□ 2.34
SCAMP3-202ENST00000355379 EYA1Q99502 592 aa29.67■■■□□ 2.34
SCAMP3-202ENST00000355379 FANCIQ9NVI1 1328 aa29.65■■■□□ 2.34
SCAMP3-202ENST00000355379 ARHGEF25Q86VW2 580 aa29.64■■■□□ 2.34
SCAMP3-202ENST00000355379 MED1Q15648 1581 aaPredicted RBP29.64■■■□□ 2.34
SCAMP3-202ENST00000355379 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
SCAMP3-202ENST00000355379 PLIN1O60240 522 aa29.62■■■□□ 2.33
SCAMP3-202ENST00000355379 LMOD2Q6P5Q4 547 aa29.62■■■□□ 2.33
SCAMP3-202ENST00000355379 BRINP3Q76B58 766 aa29.61■■■□□ 2.33
SCAMP3-202ENST00000355379 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
SCAMP3-202ENST00000355379 SLAIN2Q9P270 581 aa29.6■■■□□ 2.33
SCAMP3-202ENST00000355379 RARSP54136 660 aaKnown RBP29.59■■■□□ 2.33
SCAMP3-202ENST00000355379 IFT57Q9NWB7 429 aa29.59■■■□□ 2.33
SCAMP3-202ENST00000355379 SPATA31A3Q5VYP0 1347 aa29.58■■■□□ 2.33
SCAMP3-202ENST00000355379 GNAI1P63096 354 aa29.58■■■□□ 2.33
SCAMP3-202ENST00000355379 EXOC6Q8TAG9 804 aa29.58■■■□□ 2.33
SCAMP3-202ENST00000355379 TSR2Q969E8 191 aaKnown RBP29.58■■■□□ 2.33
SCAMP3-202ENST00000355379 BCAR3O75815 825 aa29.57■■■□□ 2.32
SCAMP3-202ENST00000355379 DDX17Q92841 729 aaKnown RBP29.57■■■□□ 2.32
SCAMP3-202ENST00000355379 ZNF853P0CG23 659 aa29.56■■■□□ 2.32
SCAMP3-202ENST00000355379 EXOSC9Q06265 439 aaKnown RBP29.55■■■□□ 2.32
SCAMP3-202ENST00000355379 CAMTA1Q9Y6Y1 1673 aa29.55■■■□□ 2.32
SCAMP3-202ENST00000355379 GAS2L2Q8NHY3 880 aa29.55■■■□□ 2.32
SCAMP3-202ENST00000355379 RGPD2P0DJD1 1756 aa29.54■■■□□ 2.32
SCAMP3-202ENST00000355379 ABCC6O95255 1503 aa29.54■■■□□ 2.32
SCAMP3-202ENST00000355379 B4GALNT3Q6L9W6 998 aa29.54■■■□□ 2.32
SCAMP3-202ENST00000355379 LTV1Q96GA3 475 aaPredicted RBP29.54■■■□□ 2.32
SCAMP3-202ENST00000355379 CRBNQ96SW2 442 aa29.53■■■□□ 2.32
SCAMP3-202ENST00000355379 NHSL1Q5SYE7 1610 aa29.53■■■□□ 2.32
SCAMP3-202ENST00000355379 NCAPD2Q15021 1401 aa29.53■■■□□ 2.32
SCAMP3-202ENST00000355379 CFAP44Q96MT7 982 aa29.52■■■□□ 2.32
SCAMP3-202ENST00000355379 SOS2Q07890 1332 aaPredicted RBP29.52■■■□□ 2.32
SCAMP3-202ENST00000355379 RGPD5Q99666 1765 aa29.52■■■□□ 2.32
SCAMP3-202ENST00000355379 MTHFSDQ2M296 383 aaKnown RBP29.51■■■□□ 2.32
SCAMP3-202ENST00000355379 THUMPD2Q9BTF0 503 aaKnown RBP29.51■■■□□ 2.32
SCAMP3-202ENST00000355379 COL18A1P39060 1754 aa29.51■■■□□ 2.31
SCAMP3-202ENST00000355379 HTATSF1O43719 755 aaKnown RBP29.5■■■□□ 2.31
SCAMP3-202ENST00000355379 PDE3AQ14432 1141 aa29.5■■■□□ 2.31
SCAMP3-202ENST00000355379 CCDC136Q96JN2 1154 aa29.5■■■□□ 2.31
SCAMP3-202ENST00000355379 C20orf194Q5TEA3 1177 aa29.5■■■□□ 2.31
SCAMP3-202ENST00000355379 ZBTB7CA1YPR0 619 aa29.49■■■□□ 2.31
SCAMP3-202ENST00000355379 FAM83GA6ND36 823 aa29.49■■■□□ 2.31
SCAMP3-202ENST00000355379 ZNF428Q96B54 188 aa29.49■■■□□ 2.31
SCAMP3-202ENST00000355379 NBPF6Q5VWK0 638 aa29.47■■■□□ 2.31
SCAMP3-202ENST00000355379 NBPF4Q96M43 638 aa29.47■■■□□ 2.31
SCAMP3-202ENST00000355379 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
SCAMP3-202ENST00000355379 ANKRD24Q8TF21 1146 aa29.45■■■□□ 2.31
SCAMP3-202ENST00000355379 LRRC37A3O60309 1634 aa29.45■■■□□ 2.31
SCAMP3-202ENST00000355379 LMO7Q8WWI1 1683 aa29.45■■■□□ 2.31
SCAMP3-202ENST00000355379 FAM208AQ9UK61 1670 aaKnown RBP29.45■■■□□ 2.3
SCAMP3-202ENST00000355379 DCTN1Q14203 1278 aa29.45■■■□□ 2.3
SCAMP3-202ENST00000355379 MBIPQ9NS73 344 aa29.45■■■□□ 2.3
SCAMP3-202ENST00000355379 CRB1P82279 1406 aa29.44■■■□□ 2.3
SCAMP3-202ENST00000355379 LTBP4Q8N2S1 1624 aa29.44■■■□□ 2.3
SCAMP3-202ENST00000355379 ALDH1L2Q3SY69 923 aa29.44■■■□□ 2.3
SCAMP3-202ENST00000355379 RTF1Q92541 710 aaKnown RBP29.44■■■□□ 2.3
SCAMP3-202ENST00000355379 CPDO75976 1380 aa29.44■■■□□ 2.3
SCAMP3-202ENST00000355379 CANXP27824 592 aaKnown RBP29.42■■■□□ 2.3
SCAMP3-202ENST00000355379 ZC3H6P61129 1189 aaKnown RBP29.42■■■□□ 2.3
SCAMP3-202ENST00000355379 CHL1O00533 1208 aa29.41■■■□□ 2.3
SCAMP3-202ENST00000355379 PLEKHG5O94827 1062 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms