RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 USP19O94966 1318 aa22.48■■□□□ 1.19
VPS13B-201ENST00000355155 ABCC6O95255 1503 aa22.48■■□□□ 1.19
VPS13B-201ENST00000355155 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
VPS13B-201ENST00000355155 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
VPS13B-201ENST00000355155 MED1Q15648 1581 aaPredicted RBP22.47■■□□□ 1.19
VPS13B-201ENST00000355155 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
VPS13B-201ENST00000355155 NCAPD2Q15021 1401 aa22.46■■□□□ 1.19
VPS13B-201ENST00000355155 IGSF1Q8N6C5 1336 aa22.46■■□□□ 1.19
VPS13B-201ENST00000355155 NLRP6P59044 892 aa22.44■■□□□ 1.18
VPS13B-201ENST00000355155 ESCO1Q5FWF5 840 aa22.44■■□□□ 1.18
VPS13B-201ENST00000355155 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
VPS13B-201ENST00000355155 LRRC37A3O60309 1634 aa22.44■■□□□ 1.18
VPS13B-201ENST00000355155 RIPK4P57078 832 aa22.44■■□□□ 1.18
VPS13B-201ENST00000355155 PPM1GO15355 546 aaPredicted RBP22.43■■□□□ 1.18
VPS13B-201ENST00000355155 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
VPS13B-201ENST00000355155 KCNH5Q8NCM2 988 aa22.43■■□□□ 1.18
VPS13B-201ENST00000355155 NEFMP07197 916 aa22.42■■□□□ 1.18
VPS13B-201ENST00000355155 CALD1Q05682 793 aaKnown RBP22.42■■□□□ 1.18
VPS13B-201ENST00000355155 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
VPS13B-201ENST00000355155 PHACTR3Q96KR7 559 aa22.42■■□□□ 1.18
VPS13B-201ENST00000355155 PXDNQ92626 1479 aa22.41■■□□□ 1.18
VPS13B-201ENST00000355155 HSP90AB2PQ58FF8 381 aa22.41■■□□□ 1.18
VPS13B-201ENST00000355155 LMO7Q8WWI1 1683 aa22.41■■□□□ 1.18
VPS13B-201ENST00000355155 HOXC9P31274 260 aa22.41■■□□□ 1.18
VPS13B-201ENST00000355155 CADPS2Q86UW7 1296 aa22.41■■□□□ 1.18
VPS13B-201ENST00000355155 ZNF853P0CG23 659 aa22.4■■□□□ 1.18
VPS13B-201ENST00000355155 HSPA2P54652 639 aa22.4■■□□□ 1.18
VPS13B-201ENST00000355155 ORAI2Q96SN7 254 aa22.4■■□□□ 1.18
VPS13B-201ENST00000355155 PSME1Q06323 249 aa22.4■■□□□ 1.18
VPS13B-201ENST00000355155 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
VPS13B-201ENST00000355155 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
VPS13B-201ENST00000355155 MSH6P52701 1360 aa22.39■■□□□ 1.18
VPS13B-201ENST00000355155 NEUROD2Q15784 382 aa22.38■■□□□ 1.17
VPS13B-201ENST00000355155 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
VPS13B-201ENST00000355155 IP6K1Q92551 441 aa22.38■■□□□ 1.17
VPS13B-201ENST00000355155 HMOX1P09601 288 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
VPS13B-201ENST00000355155 PDE3AQ14432 1141 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 ATF3P18847 181 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 IFT57Q9NWB7 429 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 COL18A1P39060 1754 aa22.37■■□□□ 1.17
VPS13B-201ENST00000355155 BRPF1P55201 1214 aaPredicted RBP22.35■■□□□ 1.17
VPS13B-201ENST00000355155 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
VPS13B-201ENST00000355155 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
VPS13B-201ENST00000355155 KRT28Q7Z3Y7 464 aa22.35■■□□□ 1.17
VPS13B-201ENST00000355155 AMPHP49418 695 aa22.34■■□□□ 1.17
VPS13B-201ENST00000355155 SULT6B1Q6IMI4 303 aa22.34■■□□□ 1.17
VPS13B-201ENST00000355155 EXOC6Q8TAG9 804 aa22.34■■□□□ 1.17
VPS13B-201ENST00000355155 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
VPS13B-201ENST00000355155 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.16
VPS13B-201ENST00000355155 EYA1Q99502 592 aa22.32■■□□□ 1.16
VPS13B-201ENST00000355155 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
VPS13B-201ENST00000355155 AAMPQ13685 434 aa22.32■■□□□ 1.16
VPS13B-201ENST00000355155 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
VPS13B-201ENST00000355155 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
VPS13B-201ENST00000355155 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
VPS13B-201ENST00000355155 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
VPS13B-201ENST00000355155 GNAI1P63096 354 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 FOXO3O43524 673 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 CRBNQ96SW2 442 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 CRB1P82279 1406 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 PLIN1O60240 522 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 ALDH1L2Q3SY69 923 aa22.3■■□□□ 1.16
VPS13B-201ENST00000355155 BCAR3O75815 825 aa22.29■■□□□ 1.16
VPS13B-201ENST00000355155 CFAP44Q96MT7 982 aa22.29■■□□□ 1.16
VPS13B-201ENST00000355155 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
VPS13B-201ENST00000355155 RGPD2P0DJD1 1756 aa22.28■■□□□ 1.16
VPS13B-201ENST00000355155 ADAMTS7Q9UKP4 1686 aa22.28■■□□□ 1.16
VPS13B-201ENST00000355155 GCP02774 474 aa22.27■■□□□ 1.16
VPS13B-201ENST00000355155 C20orf194Q5TEA3 1177 aa22.27■■□□□ 1.16
VPS13B-201ENST00000355155 ABCA3Q99758 1704 aa22.27■■□□□ 1.16
VPS13B-201ENST00000355155 EXOSC9Q06265 439 aaKnown RBP22.26■■□□□ 1.15
VPS13B-201ENST00000355155 GAS2L2Q8NHY3 880 aa22.26■■□□□ 1.15
VPS13B-201ENST00000355155 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
VPS13B-201ENST00000355155 CPDO75976 1380 aa22.25■■□□□ 1.15
VPS13B-201ENST00000355155 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
VPS13B-201ENST00000355155 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
VPS13B-201ENST00000355155 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
VPS13B-201ENST00000355155 SPATA31A3Q5VYP0 1347 aa22.24■■□□□ 1.15
VPS13B-201ENST00000355155 RGPD5Q99666 1765 aa22.24■■□□□ 1.15
VPS13B-201ENST00000355155 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
VPS13B-201ENST00000355155 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
VPS13B-201ENST00000355155 BABAM1Q9NWV8 329 aa22.22■■□□□ 1.15
VPS13B-201ENST00000355155 SOS2Q07890 1332 aaPredicted RBP22.22■■□□□ 1.15
VPS13B-201ENST00000355155 CHL1O00533 1208 aa22.22■■□□□ 1.15
VPS13B-201ENST00000355155 MS4A1P11836 297 aa22.22■■□□□ 1.15
VPS13B-201ENST00000355155 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
VPS13B-201ENST00000355155 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
VPS13B-201ENST00000355155 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
VPS13B-201ENST00000355155 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
VPS13B-201ENST00000355155 SOX12O15370 315 aa22.19■■□□□ 1.14
VPS13B-201ENST00000355155 LTBP4Q8N2S1 1624 aa22.19■■□□□ 1.14
VPS13B-201ENST00000355155 VAMP4O75379 141 aa22.19■■□□□ 1.14
VPS13B-201ENST00000355155 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
VPS13B-201ENST00000355155 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
VPS13B-201ENST00000355155 VIRMAQ69YN4 1812 aaKnown RBP22.17■■□□□ 1.14
VPS13B-201ENST00000355155 SOS1Q07889 1333 aaPredicted RBP22.17■■□□□ 1.14
VPS13B-201ENST00000355155 SSH1Q8WYL5 1049 aa22.17■■□□□ 1.14
VPS13B-201ENST00000355155 ARHGAP45Q92619 1136 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms