RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 NRKQ7Z2Y5 1582 aa27.72■■■□□ 2.03
LIMS2-202ENST00000355119 LAS1LQ9Y4W2 734 aaKnown RBP27.72■■■□□ 2.03
LIMS2-202ENST00000355119 LTKP29376 864 aa27.72■■■□□ 2.03
LIMS2-202ENST00000355119 GNAI1P63096 354 aa27.72■■■□□ 2.03
LIMS2-202ENST00000355119 IFT57Q9NWB7 429 aa27.72■■■□□ 2.03
LIMS2-202ENST00000355119 USP35Q9P2H5 1018 aa27.71■■■□□ 2.03
LIMS2-202ENST00000355119 PLEKHG3A1L390 1219 aa27.7■■■□□ 2.02
LIMS2-202ENST00000355119 DEKP35659 375 aaKnown RBP27.7■■■□□ 2.02
LIMS2-202ENST00000355119 TMEM57Q8N5G2 664 aa27.69■■■□□ 2.02
LIMS2-202ENST00000355119 EID1Q9Y6B2 187 aa27.69■■■□□ 2.02
LIMS2-202ENST00000355119 TTC21BQ7Z4L5 1316 aa27.69■■■□□ 2.02
LIMS2-202ENST00000355119 RRS1Q15050 365 aaKnown RBP27.68■■■□□ 2.02
LIMS2-202ENST00000355119 SLIT1O75093 1534 aa27.67■■■□□ 2.02
LIMS2-202ENST00000355119 ZNF853P0CG23 659 aa27.67■■■□□ 2.02
LIMS2-202ENST00000355119 ARHGAP23Q9P227 1491 aa27.65■■■□□ 2.02
LIMS2-202ENST00000355119 USP19O94966 1318 aa27.65■■■□□ 2.02
LIMS2-202ENST00000355119 ACEP12821 1306 aa27.65■■■□□ 2.02
LIMS2-202ENST00000355119 PTPRUQ92729 1446 aa27.65■■■□□ 2.02
LIMS2-202ENST00000355119 ZBTB40Q9NUA8 1239 aa27.65■■■□□ 2.02
LIMS2-202ENST00000355119 OVOS2A0A0J9YW53 1432 aa27.64■■■□□ 2.02
LIMS2-202ENST00000355119 OVOS2Q6IE36 1432 aa27.64■■■□□ 2.02
LIMS2-202ENST00000355119 VAMP4O75379 141 aa27.64■■■□□ 2.02
LIMS2-202ENST00000355119 USP6P35125 1406 aa27.64■■■□□ 2.01
LIMS2-202ENST00000355119 ARHGAP45Q92619 1136 aa27.63■■■□□ 2.01
LIMS2-202ENST00000355119 THUMPD2Q9BTF0 503 aaKnown RBP27.63■■■□□ 2.01
LIMS2-202ENST00000355119 DLG5Q8TDM6 1919 aa27.63■■■□□ 2.01
LIMS2-202ENST00000355119 CHMP4BQ9H444 224 aaKnown RBP27.62■■■□□ 2.01
LIMS2-202ENST00000355119 CEBPAP49715 358 aaPredicted RBP27.62■■■□□ 2.01
LIMS2-202ENST00000355119 NALCNQ8IZF0 1738 aa27.62■■■□□ 2.01
LIMS2-202ENST00000355119 MRPL50Q8N5N7 158 aaKnown RBP27.62■■■□□ 2.01
LIMS2-202ENST00000355119 SLC4A3P48751 1232 aa27.61■■■□□ 2.01
LIMS2-202ENST00000355119 CFAP44Q96MT7 982 aa27.61■■■□□ 2.01
LIMS2-202ENST00000355119 MBIPQ9NS73 344 aa27.61■■■□□ 2.01
LIMS2-202ENST00000355119 PTCH1Q13635 1447 aa27.6■■■□□ 2.01
LIMS2-202ENST00000355119 TBX22Q9Y458 520 aa27.6■■■□□ 2.01
LIMS2-202ENST00000355119 SEC24BO95487 1268 aa27.6■■■□□ 2.01
LIMS2-202ENST00000355119 SMC5Q8IY18 1101 aa27.6■■■□□ 2.01
LIMS2-202ENST00000355119 SLC26A8Q96RN1 970 aa27.6■■■□□ 2.01
LIMS2-202ENST00000355119 UPF2Q9HAU5 1272 aaKnown RBP27.59■■■□□ 2.01
LIMS2-202ENST00000355119 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
LIMS2-202ENST00000355119 DIP2AQ14689 1571 aa27.59■■■□□ 2.01
LIMS2-202ENST00000355119 EIF4A2Q14240 407 aaKnown RBP27.58■■■□□ 2.01
LIMS2-202ENST00000355119 USP31Q70CQ4 1352 aa27.58■■■□□ 2.01
LIMS2-202ENST00000355119 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
LIMS2-202ENST00000355119 SSH2Q76I76 1423 aa27.56■■■□□ 2
LIMS2-202ENST00000355119 TSPYL6Q8N831 410 aa27.56■■■□□ 2
LIMS2-202ENST00000355119 FER1L4A9Z1Z3 1794 aa27.56■■■□□ 2
LIMS2-202ENST00000355119 TTC21AQ8NDW8 1320 aa27.56■■■□□ 2
LIMS2-202ENST00000355119 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
LIMS2-202ENST00000355119 NUTM2FA1L443 756 aa27.53■■■□□ 2
LIMS2-202ENST00000355119 BECN1Q14457 450 aa27.53■■■□□ 2
LIMS2-202ENST00000355119 SULT6B1Q6IMI4 303 aa27.53■■■□□ 2
LIMS2-202ENST00000355119 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
LIMS2-202ENST00000355119 PEAK1Q9H792 1746 aa27.53■■■□□ 2
LIMS2-202ENST00000355119 RGPD1P0DJD0 1748 aa27.52■■■□□ 2
LIMS2-202ENST00000355119 ABCC4O15439 1325 aa27.51■■□□□ 1.99
LIMS2-202ENST00000355119 TBC1D32Q96NH3 1257 aa27.5■■□□□ 1.99
LIMS2-202ENST00000355119 API5Q9BZZ5 524 aaKnown RBP27.5■■□□□ 1.99
LIMS2-202ENST00000355119 FAM83GA6ND36 823 aa27.5■■□□□ 1.99
LIMS2-202ENST00000355119 ZBTB7BO15156 539 aaPredicted RBP27.5■■□□□ 1.99
LIMS2-202ENST00000355119 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
LIMS2-202ENST00000355119 C8orf58Q8NAV2 365 aa27.5■■□□□ 1.99
LIMS2-202ENST00000355119 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
LIMS2-202ENST00000355119 HAP1P54257 671 aaPredicted RBP27.48■■□□□ 1.99
LIMS2-202ENST00000355119 NUCB1Q02818 461 aa27.48■■□□□ 1.99
LIMS2-202ENST00000355119 ELL2O00472 640 aaPredicted RBP27.48■■□□□ 1.99
LIMS2-202ENST00000355119 ARHGEF10O15013 1369 aa27.47■■□□□ 1.99
LIMS2-202ENST00000355119 XRN1Q8IZH2 1706 aaKnown RBP27.47■■□□□ 1.99
LIMS2-202ENST00000355119 DCTN1Q14203 1278 aa27.46■■□□□ 1.99
LIMS2-202ENST00000355119 NFKBIBQ15653 356 aa27.46■■□□□ 1.99
LIMS2-202ENST00000355119 HSP90AB2PQ58FF8 381 aa27.46■■□□□ 1.99
LIMS2-202ENST00000355119 KIF24Q5T7B8 1368 aa27.46■■□□□ 1.99
LIMS2-202ENST00000355119 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
LIMS2-202ENST00000355119 GCC1Q96CN9 775 aa27.44■■□□□ 1.98
LIMS2-202ENST00000355119 ANKARQ7Z5J8 1434 aa27.44■■□□□ 1.98
LIMS2-202ENST00000355119 NGDNQ8NEJ9 315 aaKnown RBP27.43■■□□□ 1.98
LIMS2-202ENST00000355119 SBNO1A3KN83 1393 aa27.43■■□□□ 1.98
LIMS2-202ENST00000355119 CHL1O00533 1208 aa27.42■■□□□ 1.98
LIMS2-202ENST00000355119 CHD1LQ86WJ1 897 aa27.42■■□□□ 1.98
LIMS2-202ENST00000355119 FLT4P35916 1363 aa27.42■■□□□ 1.98
LIMS2-202ENST00000355119 KIAA0232Q92628 1395 aa27.42■■□□□ 1.98
LIMS2-202ENST00000355119 MAP3K19Q56UN5 1328 aa27.42■■□□□ 1.98
LIMS2-202ENST00000355119 PLPPR3Q6T4P5 718 aa27.41■■□□□ 1.98
LIMS2-202ENST00000355119 RGPD8O14715 1765 aaPredicted RBP27.39■■□□□ 1.98
LIMS2-202ENST00000355119 PIK3C2AO00443 1686 aa27.37■■□□□ 1.97
LIMS2-202ENST00000355119 LNPKQ9C0E8 428 aa27.37■■□□□ 1.97
LIMS2-202ENST00000355119 SOX12O15370 315 aa27.36■■□□□ 1.97
LIMS2-202ENST00000355119 MCM10Q7L590 875 aa27.36■■□□□ 1.97
LIMS2-202ENST00000355119 CRB1P82279 1406 aa27.36■■□□□ 1.97
LIMS2-202ENST00000355119 C22orf23Q9BZE7 217 aa27.34■■□□□ 1.97
LIMS2-202ENST00000355119 C1orf115Q9H7X2 142 aa27.34■■□□□ 1.97
LIMS2-202ENST00000355119 KDRP35968 1356 aa27.34■■□□□ 1.97
LIMS2-202ENST00000355119 AMPHP49418 695 aa27.34■■□□□ 1.97
LIMS2-202ENST00000355119 ANKRD45Q5TZF3 282 aa27.33■■□□□ 1.97
LIMS2-202ENST00000355119 INTS3Q68E01 1043 aaKnown RBP27.33■■□□□ 1.97
LIMS2-202ENST00000355119 CEP170BQ9Y4F5 1589 aaPredicted RBP27.33■■□□□ 1.97
LIMS2-202ENST00000355119 MFAP1P55081 439 aaKnown RBP27.33■■□□□ 1.96
LIMS2-202ENST00000355119 USP54Q70EL1 1684 aa27.32■■□□□ 1.96
LIMS2-202ENST00000355119 BCL11AQ9H165 835 aa27.32■■□□□ 1.96
LIMS2-202ENST00000355119 IGSF1Q8N6C5 1336 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms