RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
NEIL1-201ENST00000355059 RIMS1Q86UR5 1692 aaKnown RBP14□□□□□ -0.17
NEIL1-201ENST00000355059 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
NEIL1-201ENST00000355059 PTPRMP28827 1452 aa14□□□□□ -0.17
NEIL1-201ENST00000355059 NPHP3Q7Z494 1330 aa14□□□□□ -0.17
NEIL1-201ENST00000355059 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 GCP02774 474 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
NEIL1-201ENST00000355059 MAP3K19Q56UN5 1328 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 SYNMO15061 1565 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 ADGRB3O60242 1522 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 FRAT2O75474 233 aaPredicted RBP13.99□□□□□ -0.17
NEIL1-201ENST00000355059 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
NEIL1-201ENST00000355059 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
NEIL1-201ENST00000355059 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 ASXL1Q8IXJ9 1541 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 TOM1O60784 492 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 DUSP27Q5VZP5 1158 aa13.98□□□□□ -0.17
NEIL1-201ENST00000355059 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
NEIL1-201ENST00000355059 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
NEIL1-201ENST00000355059 NPHP1O15259 732 aa13.97□□□□□ -0.17
NEIL1-201ENST00000355059 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
NEIL1-201ENST00000355059 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.17
NEIL1-201ENST00000355059 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
NEIL1-201ENST00000355059 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
NEIL1-201ENST00000355059 MADDQ8WXG6 1647 aa13.96□□□□□ -0.18
NEIL1-201ENST00000355059 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.18
NEIL1-201ENST00000355059 WWC1Q8IX03 1113 aa13.96□□□□□ -0.18
NEIL1-201ENST00000355059 FCHSD2O94868 740 aa13.95□□□□□ -0.18
NEIL1-201ENST00000355059 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
NEIL1-201ENST00000355059 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
NEIL1-201ENST00000355059 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
NEIL1-201ENST00000355059 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
NEIL1-201ENST00000355059 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
NEIL1-201ENST00000355059 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
NEIL1-201ENST00000355059 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
NEIL1-201ENST00000355059 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
NEIL1-201ENST00000355059 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
NEIL1-201ENST00000355059 PLEKHG3A1L390 1219 aa13.93□□□□□ -0.18
NEIL1-201ENST00000355059 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
NEIL1-201ENST00000355059 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
NEIL1-201ENST00000355059 TTC21AQ8NDW8 1320 aa13.93□□□□□ -0.18
NEIL1-201ENST00000355059 ANP32BQ92688 251 aaKnown RBP13.93□□□□□ -0.18
NEIL1-201ENST00000355059 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
NEIL1-201ENST00000355059 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
NEIL1-201ENST00000355059 GNAI1P63096 354 aa13.92□□□□□ -0.18
NEIL1-201ENST00000355059 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
NEIL1-201ENST00000355059 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
NEIL1-201ENST00000355059 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
NEIL1-201ENST00000355059 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
NEIL1-201ENST00000355059 PUS7Q96PZ0 661 aaKnown RBP13.91□□□□□ -0.18
NEIL1-201ENST00000355059 EYA1Q99502 592 aa13.91□□□□□ -0.18
NEIL1-201ENST00000355059 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
NEIL1-201ENST00000355059 ZFYVE9O95405 1425 aa13.91□□□□□ -0.18
NEIL1-201ENST00000355059 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
NEIL1-201ENST00000355059 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.18
NEIL1-201ENST00000355059 SETD1BQ9UPS6 1966 aaKnown RBP13.9□□□□□ -0.18
NEIL1-201ENST00000355059 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
NEIL1-201ENST00000355059 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
NEIL1-201ENST00000355059 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
NEIL1-201ENST00000355059 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
NEIL1-201ENST00000355059 SIRT1Q96EB6 747 aa13.9□□□□□ -0.19
NEIL1-201ENST00000355059 DEPDC5O75140 1603 aa13.89□□□□□ -0.19
NEIL1-201ENST00000355059 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
NEIL1-201ENST00000355059 FKBP5Q13451 457 aaPredicted RBP13.89□□□□□ -0.19
NEIL1-201ENST00000355059 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
NEIL1-201ENST00000355059 CHMP4BQ9H444 224 aaKnown RBP13.89□□□□□ -0.19
NEIL1-201ENST00000355059 HOXC9P31274 260 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 L1TD1Q5T7N2 865 aaKnown RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 DZIP1LQ8IYY4 767 aaKnown RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 FER1L4A9Z1Z3 1794 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 NSD2O96028 1365 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-201ENST00000355059 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
NEIL1-201ENST00000355059 EDC4Q6P2E9 1401 aaKnown RBP13.87□□□□□ -0.19
NEIL1-201ENST00000355059 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
NEIL1-201ENST00000355059 IGHDP01880 384 aa13.87□□□□□ -0.19
NEIL1-201ENST00000355059 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
NEIL1-201ENST00000355059 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
NEIL1-201ENST00000355059 CABP4P57796 275 aa13.86□□□□□ -0.19
NEIL1-201ENST00000355059 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
NEIL1-201ENST00000355059 TAF7LQ5H9L4 462 aa13.86□□□□□ -0.19
NEIL1-201ENST00000355059 GNAT3A8MTJ3 354 aa13.86□□□□□ -0.19
NEIL1-201ENST00000355059 SPATA31D1Q6ZQQ2 1576 aa13.86□□□□□ -0.19
NEIL1-201ENST00000355059 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
NEIL1-201ENST00000355059 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
NEIL1-201ENST00000355059 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
NEIL1-201ENST00000355059 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
NEIL1-201ENST00000355059 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
NEIL1-201ENST00000355059 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
NEIL1-201ENST00000355059 MYL6BP14649 208 aa13.84□□□□□ -0.19
NEIL1-201ENST00000355059 ANXA1P04083 346 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms