RNA–Protein interactions for RNA: ENST00000354958.6

PLEC-204, Transcript of plectin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PLEC, Length 14,751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-204ENST00000354958 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
PLEC-204ENST00000354958 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
PLEC-204ENST00000354958 NUP62CLQ9H1M0 184 aa12.88□□□□□ -0.35
PLEC-204ENST00000354958 CCDC175P0C221 793 aa12.88□□□□□ -0.35
PLEC-204ENST00000354958 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
PLEC-204ENST00000354958 SPECC1LQ69YQ0 1117 aa12.88□□□□□ -0.35
PLEC-204ENST00000354958 CETN2P41208 172 aa12.88□□□□□ -0.35
PLEC-204ENST00000354958 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
PLEC-204ENST00000354958 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
PLEC-204ENST00000354958 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
PLEC-204ENST00000354958 GOLGA6L9A6NEM1 432 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
PLEC-204ENST00000354958 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
PLEC-204ENST00000354958 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
PLEC-204ENST00000354958 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 WASHC4Q2M389 1173 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 KRT32Q14532 448 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 VPS36Q86VN1 386 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
PLEC-204ENST00000354958 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 WASF1Q92558 559 aa12.86□□□□□ -0.35
PLEC-204ENST00000354958 KRT222Q8N1A0 295 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
PLEC-204ENST00000354958 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
PLEC-204ENST00000354958 MNAT1P51948 309 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
PLEC-204ENST00000354958 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
PLEC-204ENST00000354958 GNAI2P04899 355 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
PLEC-204ENST00000354958 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■■■□ 24.2
PLEC-204ENST00000354958 RAD21O60216 631 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 TSPYL4Q9UJ04 414 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
PLEC-204ENST00000354958 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
PLEC-204ENST00000354958 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 EHBP1Q8NDI1 1231 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 PLEKHH1Q9ULM0 1364 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 TUBB4AP04350 444 aa12.84□□□□□ -0.35
PLEC-204ENST00000354958 KRT18P05783 430 aaKnown RBP12.83□□□□□ -0.35
PLEC-204ENST00000354958 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.35
PLEC-204ENST00000354958 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.35
PLEC-204ENST00000354958 CBX1P83916 185 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 GPATCH11Q8N954 259 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.83□□□□□ -0.362e-6■■■■□ 21.1
PLEC-204ENST00000354958 V9GYY5 206 aaPredicted RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 WDR63Q8IWG1 891 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 USO1O60763 962 aaKnown RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 RNF187Q5TA31 235 aaPredicted RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
PLEC-204ENST00000354958 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
PLEC-204ENST00000354958 TANGO6Q9C0B7 1094 aa12.82□□□□□ -0.36
PLEC-204ENST00000354958 ALS2CR12Q96Q35 445 aa12.82□□□□□ -0.36
PLEC-204ENST00000354958 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
PLEC-204ENST00000354958 DDX12PQ92771 950 aa12.82□□□□□ -0.36
PLEC-204ENST00000354958 CEBPZQ03701 1054 aaKnown RBP12.82□□□□□ -0.36
PLEC-204ENST00000354958 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
PLEC-204ENST00000354958 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
PLEC-204ENST00000354958 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
PLEC-204ENST00000354958 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 HSPA4P34932 840 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
PLEC-204ENST00000354958 C6orf163Q5TEZ5 329 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 SETSIPP0DME0 302 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
PLEC-204ENST00000354958 DAAM2Q86T65 1068 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
PLEC-204ENST00000354958 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
PLEC-204ENST00000354958 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
PLEC-204ENST00000354958 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
PLEC-204ENST00000354958 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
PLEC-204ENST00000354958 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
PLEC-204ENST00000354958 DNAI2Q9GZS0 605 aa12.8□□□□□ -0.36
PLEC-204ENST00000354958 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms