RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
CAPN9-202ENST00000354537 KIF20BQ96Q89 1820 aa14.19□□□□□ -0.14
CAPN9-202ENST00000354537 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
CAPN9-202ENST00000354537 KLHL40Q2TBA0 621 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 ARXQ96QS3 562 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 ZNF853P0CG23 659 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 RABEP1Q15276 862 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
CAPN9-202ENST00000354537 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
CAPN9-202ENST00000354537 TPM2P07951 284 aa14.17□□□□□ -0.14
CAPN9-202ENST00000354537 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
CAPN9-202ENST00000354537 ARHGEF40Q8TER5 1519 aa14.17□□□□□ -0.14
CAPN9-202ENST00000354537 NUCB2P80303 420 aa14.16□□□□□ -0.14
CAPN9-202ENST00000354537 ATP7BP35670 1465 aa14.16□□□□□ -0.14
CAPN9-202ENST00000354537 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
CAPN9-202ENST00000354537 NEO1Q92859 1461 aa14.16□□□□□ -0.14
CAPN9-202ENST00000354537 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
CAPN9-202ENST00000354537 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
CAPN9-202ENST00000354537 HS1BP3Q53T59 392 aa14.15□□□□□ -0.14
CAPN9-202ENST00000354537 ZNF445P59923 1031 aa14.15□□□□□ -0.14
CAPN9-202ENST00000354537 IDI1Q13907 227 aa14.15□□□□□ -0.14
CAPN9-202ENST00000354537 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
CAPN9-202ENST00000354537 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
CAPN9-202ENST00000354537 TERF1P54274 439 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 CWC22Q9HCG8 908 aaKnown RBP14.14□□□□□ -0.15
CAPN9-202ENST00000354537 DLC1Q96QB1 1528 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 CD2BP2O95400 341 aaKnown RBP14.14□□□□□ -0.15
CAPN9-202ENST00000354537 BAG4O95429 457 aaKnown RBP14.14□□□□□ -0.15
CAPN9-202ENST00000354537 DCTPP1Q9H773 170 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 POLKQ9UBT6 870 aa14.14□□□□□ -0.15
CAPN9-202ENST00000354537 HSP90AA2PQ14568 343 aaPredicted RBP14.13□□□□□ -0.15
CAPN9-202ENST00000354537 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
CAPN9-202ENST00000354537 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
CAPN9-202ENST00000354537 HAP1P54257 671 aaPredicted RBP14.13□□□□□ -0.15
CAPN9-202ENST00000354537 DIP2CQ9Y2E4 1556 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 CYP2E1P05181 493 aaPredicted RBP14.12□□□□□ -0.15
CAPN9-202ENST00000354537 SSFA2P28290 1259 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 NASPP49321 788 aaPredicted RBP14.12□□□□□ -0.15
CAPN9-202ENST00000354537 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 CDK19Q9BWU1 502 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
CAPN9-202ENST00000354537 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
CAPN9-202ENST00000354537 AATKQ6ZMQ8 1374 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN9-202ENST00000354537 PLEKHM2Q8IWE5 1019 aa14.12□□□□□ -0.15
CAPN9-202ENST00000354537 MINK1Q8N4C8 1332 aaPredicted RBP14.11□□□□□ -0.15
CAPN9-202ENST00000354537 SAFB2Q14151 953 aaKnown RBP eCLIP14.11□□□□□ -0.15
CAPN9-202ENST00000354537 STK26Q9P289 416 aa14.11□□□□□ -0.15
CAPN9-202ENST00000354537 TTC22Q5TAA0 569 aa14.1□□□□□ -0.15
CAPN9-202ENST00000354537 DDX49Q9Y6V7 483 aaKnown RBP14.1□□□□□ -0.15
CAPN9-202ENST00000354537 TWISTNBQ3B726 338 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-202ENST00000354537 NUTM2DQ5VT03 806 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-202ENST00000354537 INTS3Q68E01 1043 aaKnown RBP14.1□□□□□ -0.15
CAPN9-202ENST00000354537 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-202ENST00000354537 USP26Q9BXU7 913 aa14.1□□□□□ -0.15
CAPN9-202ENST00000354537 MBIPQ9NS73 344 aa14.1□□□□□ -0.15
CAPN9-202ENST00000354537 ALKQ9UM73 1620 aa14.1□□□□□ -0.15
CAPN9-202ENST00000354537 GSPT1P15170 499 aaKnown RBP14.09□□□□□ -0.15
CAPN9-202ENST00000354537 IL13P35225 146 aa14.09□□□□□ -0.15
CAPN9-202ENST00000354537 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
CAPN9-202ENST00000354537 PHACTR3Q96KR7 559 aa14.09□□□□□ -0.15
CAPN9-202ENST00000354537 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
CAPN9-202ENST00000354537 PREX1Q8TCU6 1659 aa14.09□□□□□ -0.15
CAPN9-202ENST00000354537 CASC1Q6TDU7 716 aa14.08□□□□□ -0.15
CAPN9-202ENST00000354537 TSPYL6Q8N831 410 aa14.08□□□□□ -0.15
CAPN9-202ENST00000354537 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.15
CAPN9-202ENST00000354537 OFD1O75665 1012 aa14.08□□□□□ -0.16
CAPN9-202ENST00000354537 C1orf115Q9H7X2 142 aa14.08□□□□□ -0.16
CAPN9-202ENST00000354537 EDC4Q6P2E9 1401 aaKnown RBP14.08□□□□□ -0.16
CAPN9-202ENST00000354537 LMBRD1Q9NUN5 540 aa14.07□□□□□ -0.16
CAPN9-202ENST00000354537 ST18O60284 1047 aa14.06□□□□□ -0.16
CAPN9-202ENST00000354537 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.06□□□□□ -0.16
CAPN9-202ENST00000354537 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
CAPN9-202ENST00000354537 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
CAPN9-202ENST00000354537 PDLIM2Q96JY6 352 aa14.05□□□□□ -0.16
CAPN9-202ENST00000354537 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
CAPN9-202ENST00000354537 KNDC1Q76NI1 1749 aa14.05□□□□□ -0.16
CAPN9-202ENST00000354537 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
CAPN9-202ENST00000354537 REC8O95072 547 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
CAPN9-202ENST00000354537 MCM5P33992 734 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 PDCL3Q9H2J4 239 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
CAPN9-202ENST00000354537 PTPRCP08575 1304 aa14.03□□□□□ -0.16
CAPN9-202ENST00000354537 ZNF500O60304 480 aaPredicted RBP14.03□□□□□ -0.16
CAPN9-202ENST00000354537 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
CAPN9-202ENST00000354537 NOL7Q9UMY1 257 aaKnown RBP14.03□□□□□ -0.16
CAPN9-202ENST00000354537 HMOX1P09601 288 aa14.03□□□□□ -0.16
CAPN9-202ENST00000354537 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
CAPN9-202ENST00000354537 MCM2P49736 904 aa14.02□□□□□ -0.16
CAPN9-202ENST00000354537 OSBPL3Q9H4L5 887 aa14.02□□□□□ -0.16
CAPN9-202ENST00000354537 RGS12O14924 1447 aa14.01□□□□□ -0.17
CAPN9-202ENST00000354537 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
CAPN9-202ENST00000354537 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms