RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 RTL1A6NKG5 1358 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 MAP2P11137 1827 aaKnown RBP4.72□□□□□ -1.65
RNF38-203ENST00000353739 SENP3-EIF4A1A0A087X0R7 540 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 ATF7IPQ6VMQ6 1270 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.71□□□□□ -1.65
RNF38-203ENST00000353739 IL13P35225 146 aa4.71□□□□□ -1.65
RNF38-203ENST00000353739 NPM2Q86SE8 214 aaKnown RBP4.71□□□□□ -1.65
RNF38-203ENST00000353739 SPINK5Q9NQ38 1064 aaPredicted RBP4.71□□□□□ -1.65
RNF38-203ENST00000353739 POLKQ9UBT6 870 aa4.71□□□□□ -1.65
RNF38-203ENST00000353739 TRIM35Q9UPQ4 493 aa4.71□□□□□ -1.65
RNF38-203ENST00000353739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNF38-203ENST00000353739 COG6Q9Y2V7 657 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 KIAA0232Q92628 1395 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 HTATSF1O43719 755 aaKnown RBP4.71□□□□□ -1.66
RNF38-203ENST00000353739 PRKAR2BP31323 418 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
RNF38-203ENST00000353739 GCC1Q96CN9 775 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 SBNO1A3KN83 1393 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 WAPLQ7Z5K2 1190 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 TXNDC2Q86VQ3 553 aa4.71□□□□□ -1.66
RNF38-203ENST00000353739 ITPRIPQ8IWB1 547 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 PANK1Q8TE04 598 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 ROBO2Q9HCK4 1378 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 C8orf34Q49A92 452 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 BABAM1Q9NWV8 329 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 FLT4P35916 1363 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 GAS2L2Q8NHY3 880 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 PTPRCP08575 1304 aa4.7□□□□□ -1.66
RNF38-203ENST00000353739 LRRC37A3O60309 1634 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 KIF1AQ12756 1690 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 PTMSP20962 102 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 RGS3P49796 1198 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 NOB1Q9ULX3 412 aaKnown RBP4.69□□□□□ -1.66
RNF38-203ENST00000353739 ADGRL3Q9HAR2 1447 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 NME9Q86XW9 330 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 IL27Q8NEV9 243 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 DMRT2Q9Y5R5 561 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 SSH2Q76I76 1423 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 ACEP12821 1306 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 ZNF853P0CG23 659 aa4.69□□□□□ -1.66
RNF38-203ENST00000353739 TRIM27P14373 513 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 MRPL50Q8N5N7 158 aaKnown RBP4.68□□□□□ -1.66
RNF38-203ENST00000353739 SSH1Q8WYL5 1049 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 RTF1Q92541 710 aaKnown RBP4.68□□□□□ -1.66
RNF38-203ENST00000353739 PDZRN3Q9UPQ7 1066 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 PLEKHG2Q9H7P9 1386 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 IGHDP01880 384 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 PHRF1Q9P1Y6 1649 aaKnown RBP4.68□□□□□ -1.66
RNF38-203ENST00000353739 NWD1Q149M9 1564 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 ABCC4O15439 1325 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 TSR2Q969E8 191 aaKnown RBP4.68□□□□□ -1.66
RNF38-203ENST00000353739 PXDNLA1KZ92 1463 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 LMTK3Q96Q04 1460 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 PEAK1Q9H792 1746 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 PIK3C2AO00443 1686 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 TWISTNBQ3B726 338 aaPredicted RBP4.68□□□□□ -1.66
RNF38-203ENST00000353739 CASC1Q6TDU7 716 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 AMOTL2Q9Y2J4 779 aa4.68□□□□□ -1.66
RNF38-203ENST00000353739 DLG5Q8TDM6 1919 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 SMC5Q8IY18 1101 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 EMILIN1Q9Y6C2 1016 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 N4BP2Q86UW6 1770 aaPredicted RBP4.67□□□□□ -1.66
RNF38-203ENST00000353739 NGDNQ8NEJ9 315 aaKnown RBP4.67□□□□□ -1.66
RNF38-203ENST00000353739 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 CHD2O14647 1828 aaKnown RBP4.67□□□□□ -1.66
RNF38-203ENST00000353739 PRR36Q9H6K5 1346 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 HMMRO75330 724 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 NUCB1Q02818 461 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 LAS1LQ9Y4W2 734 aaKnown RBP4.67□□□□□ -1.66
RNF38-203ENST00000353739 OVOS2A0A0G2JMS6 1433 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 ABCC6O95255 1503 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 ADAMTSL3P82987 1691 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 TMEM57Q8N5G2 664 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 MBIPQ9NS73 344 aa4.67□□□□□ -1.66
RNF38-203ENST00000353739 VAMP4O75379 141 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 EIF4A2Q14240 407 aaKnown RBP4.66□□□□□ -1.66
RNF38-203ENST00000353739 ANKLE2Q86XL3 938 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 KDRP35968 1356 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 NCAPD2Q15021 1401 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 AMPHP49418 695 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 CCT4P50991 539 aaKnown RBP4.66□□□□□ -1.66
RNF38-203ENST00000353739 KCNH5Q8NCM2 988 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 HMOX1P09601 288 aa4.66□□□□□ -1.66
RNF38-203ENST00000353739 RPAP2Q8IXW5 612 aaPredicted RBP4.66□□□□□ -1.66
RNF38-203ENST00000353739 RLBP1P12271 317 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 CHD1LQ86WJ1 897 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 TBC1D32Q96NH3 1257 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 BCL2L13Q9BXK5 485 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 PCDHB15Q9Y5E8 787 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 IGSF1Q8N6C5 1336 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 FAM208AQ9UK61 1670 aaKnown RBP4.65□□□□□ -1.66
RNF38-203ENST00000353739 PAK3O75914 559 aaPredicted RBP4.65□□□□□ -1.66
RNF38-203ENST00000353739 LTKP29376 864 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 HSCBQ8IWL3 235 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 HOMEZQ8IX15 550 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 HDAC5Q9UQL6 1122 aa4.65□□□□□ -1.66
RNF38-203ENST00000353739 MSH6P52701 1360 aa4.65□□□□□ -1.67
RNF38-203ENST00000353739 BMP2KLQ5H9B9 411 aa4.65□□□□□ -1.67
RNF38-203ENST00000353739 INTS3Q68E01 1043 aaKnown RBP4.65□□□□□ -1.67
RNF38-203ENST00000353739 STK31Q9BXU1 1019 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms