RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CHMP4BQ9H444 224 aaKnown RBP30.78■■■□□ 2.52
CPNE1-202ENST00000352393 IFT57Q9NWB7 429 aa30.78■■■□□ 2.52
CPNE1-202ENST00000352393 GCC1Q96CN9 775 aa30.77■■■□□ 2.52
CPNE1-202ENST00000352393 ABCC4O15439 1325 aa30.77■■■□□ 2.52
CPNE1-202ENST00000352393 ZNF853P0CG23 659 aa30.76■■■□□ 2.52
CPNE1-202ENST00000352393 HMOX1P09601 288 aa30.76■■■□□ 2.51
CPNE1-202ENST00000352393 THUMPD2Q9BTF0 503 aaKnown RBP30.76■■■□□ 2.51
CPNE1-202ENST00000352393 SPATA31D1Q6ZQQ2 1576 aa30.76■■■□□ 2.51
CPNE1-202ENST00000352393 MON2Q7Z3U7 1717 aa30.76■■■□□ 2.51
CPNE1-202ENST00000352393 GNAI1P63096 354 aa30.75■■■□□ 2.51
CPNE1-202ENST00000352393 DIP2BQ9P265 1576 aa30.75■■■□□ 2.51
CPNE1-202ENST00000352393 IL13P35225 146 aa30.74■■■□□ 2.51
CPNE1-202ENST00000352393 WAPLQ7Z5K2 1190 aa30.74■■■□□ 2.51
CPNE1-202ENST00000352393 TSPYL6Q8N831 410 aa30.74■■■□□ 2.51
CPNE1-202ENST00000352393 NRXN3Q9Y4C0 1643 aa30.74■■■□□ 2.51
CPNE1-202ENST00000352393 AATKQ6ZMQ8 1374 aa30.73■■■□□ 2.51
CPNE1-202ENST00000352393 RIMS2Q9UQ26 1411 aa30.73■■■□□ 2.51
CPNE1-202ENST00000352393 STAG3Q9UJ98 1225 aa30.73■■■□□ 2.51
CPNE1-202ENST00000352393 EMILIN1Q9Y6C2 1016 aa30.73■■■□□ 2.51
CPNE1-202ENST00000352393 AGLP35573 1532 aa30.72■■■□□ 2.51
CPNE1-202ENST00000352393 GOLGA6L3A6NEY3 463 aa30.71■■■□□ 2.51
CPNE1-202ENST00000352393 MBIPQ9NS73 344 aa30.71■■■□□ 2.51
CPNE1-202ENST00000352393 TRAK2O60296 914 aa30.71■■■□□ 2.51
CPNE1-202ENST00000352393 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.71■■■□□ 2.51
CPNE1-202ENST00000352393 C1orf115Q9H7X2 142 aa30.7■■■□□ 2.51
CPNE1-202ENST00000352393 FAM69CQ0P6D2 419 aa30.7■■■□□ 2.5
CPNE1-202ENST00000352393 ANKRD45Q5TZF3 282 aa30.7■■■□□ 2.5
CPNE1-202ENST00000352393 DDX11L8A8MPP1 907 aa30.69■■■□□ 2.5
CPNE1-202ENST00000352393 KNDC1Q76NI1 1749 aa30.69■■■□□ 2.5
CPNE1-202ENST00000352393 XRCC6P12956 609 aaKnown RBP eCLIP30.68■■■□□ 2.5
CPNE1-202ENST00000352393 SIRT2Q8IXJ6 389 aa30.68■■■□□ 2.5
CPNE1-202ENST00000352393 AKAP12Q02952 1782 aa30.68■■■□□ 2.5
CPNE1-202ENST00000352393 KIF2CQ99661 725 aa30.68■■■□□ 2.5
CPNE1-202ENST00000352393 C3P01024 1663 aa30.67■■■□□ 2.5
CPNE1-202ENST00000352393 NME9Q86XW9 330 aa30.67■■■□□ 2.5
CPNE1-202ENST00000352393 NRKQ7Z2Y5 1582 aa30.66■■■□□ 2.5
CPNE1-202ENST00000352393 CPS1P31327 1500 aa30.66■■■□□ 2.5
CPNE1-202ENST00000352393 CIZ1Q9ULV3 898 aaPredicted RBP30.66■■■□□ 2.5
CPNE1-202ENST00000352393 LMOD3Q0VAK6 560 aa30.65■■■□□ 2.5
CPNE1-202ENST00000352393 ITSN1Q15811 1721 aa30.65■■■□□ 2.5
CPNE1-202ENST00000352393 TWISTNBQ3B726 338 aaPredicted RBP30.65■■■□□ 2.5
CPNE1-202ENST00000352393 GZF1Q9H116 711 aaPredicted RBP30.65■■■□□ 2.5
CPNE1-202ENST00000352393 CFAP44Q96MT7 982 aa30.64■■■□□ 2.5
CPNE1-202ENST00000352393 WASLO00401 505 aaPredicted RBP30.64■■■□□ 2.49
CPNE1-202ENST00000352393 KIF24Q5T7B8 1368 aa30.63■■■□□ 2.49
CPNE1-202ENST00000352393 TBC1D9Q6ZT07 1266 aa30.63■■■□□ 2.49
CPNE1-202ENST00000352393 PPP6R1Q9UPN7 881 aa30.63■■■□□ 2.49
CPNE1-202ENST00000352393 API5Q9BZZ5 524 aaKnown RBP30.62■■■□□ 2.49
CPNE1-202ENST00000352393 ELL2O00472 640 aaPredicted RBP30.61■■■□□ 2.49
CPNE1-202ENST00000352393 C8orf58Q8NAV2 365 aa30.61■■■□□ 2.49
CPNE1-202ENST00000352393 ZRANB1Q9UGI0 708 aa30.61■■■□□ 2.49
CPNE1-202ENST00000352393 HSP90AB1P08238 724 aaKnown RBP30.61■■■□□ 2.49
CPNE1-202ENST00000352393 RRAGDQ9NQL2 400 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-202ENST00000352393 TNPO1Q92973 898 aaKnown RBP30.58■■■□□ 2.49
CPNE1-202ENST00000352393 RAB3GAP1Q15042 981 aa30.58■■■□□ 2.49
CPNE1-202ENST00000352393 ARXQ96QS3 562 aa30.57■■■□□ 2.48
CPNE1-202ENST00000352393 PANK2Q9BZ23 570 aa30.56■■■□□ 2.48
CPNE1-202ENST00000352393 METP08581 1390 aa30.56■■■□□ 2.48
CPNE1-202ENST00000352393 CD2BP2O95400 341 aaKnown RBP30.56■■■□□ 2.48
CPNE1-202ENST00000352393 COG3Q96JB2 828 aa30.56■■■□□ 2.48
CPNE1-202ENST00000352393 TECPR2O15040 1411 aa30.56■■■□□ 2.48
CPNE1-202ENST00000352393 TSPOAP1O95153 1857 aa30.55■■■□□ 2.48
CPNE1-202ENST00000352393 CDC45O75419 566 aa30.55■■■□□ 2.48
CPNE1-202ENST00000352393 MRE11P49959 708 aa30.55■■■□□ 2.48
CPNE1-202ENST00000352393 NUDT16Q96DE0 195 aaKnown RBP30.54■■■□□ 2.48
CPNE1-202ENST00000352393 ISY1Q9ULR0 285 aaKnown RBP30.54■■■□□ 2.48
CPNE1-202ENST00000352393 FAM83GA6ND36 823 aa30.53■■■□□ 2.48
CPNE1-202ENST00000352393 K7ELQ4 463 aaPredicted RBP30.53■■■□□ 2.48
CPNE1-202ENST00000352393 RRS1Q15050 365 aaKnown RBP30.53■■■□□ 2.48
CPNE1-202ENST00000352393 GBP4Q96PP9 640 aa30.52■■■□□ 2.48
CPNE1-202ENST00000352393 RGS12O14924 1447 aa30.52■■■□□ 2.48
CPNE1-202ENST00000352393 GSPT1P15170 499 aaKnown RBP30.52■■■□□ 2.48
CPNE1-202ENST00000352393 ATP10DQ9P241 1426 aa30.51■■■□□ 2.48
CPNE1-202ENST00000352393 DCTPP1Q9H773 170 aa30.5■■■□□ 2.47
CPNE1-202ENST00000352393 CCDC61Q9Y6R9 512 aa30.5■■■□□ 2.47
CPNE1-202ENST00000352393 INTS3Q68E01 1043 aaKnown RBP30.49■■■□□ 2.47
CPNE1-202ENST00000352393 PLEKHM2Q8IWE5 1019 aa30.49■■■□□ 2.47
CPNE1-202ENST00000352393 NCKAP5LQ9HCH0 1330 aa30.48■■■□□ 2.47
CPNE1-202ENST00000352393 DCTN1Q14203 1278 aa30.48■■■□□ 2.47
CPNE1-202ENST00000352393 SIRT1Q96EB6 747 aa30.48■■■□□ 2.47
CPNE1-202ENST00000352393 RBM42Q9BTD8 480 aaKnown RBP30.47■■■□□ 2.47
CPNE1-202ENST00000352393 GRPEL1Q9HAV7 217 aa30.47■■■□□ 2.47
CPNE1-202ENST00000352393 TXNDC2Q86VQ3 553 aa30.47■■■□□ 2.47
CPNE1-202ENST00000352393 PTMSP20962 102 aa30.46■■■□□ 2.47
CPNE1-202ENST00000352393 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.46■■■□□ 2.47
CPNE1-202ENST00000352393 RGPD1P0DJD0 1748 aa30.46■■■□□ 2.47
CPNE1-202ENST00000352393 TOPAZ1Q8N9V7 1692 aa30.45■■■□□ 2.47
CPNE1-202ENST00000352393 EIF5BO60841 1220 aaKnown RBP30.45■■■□□ 2.47
CPNE1-202ENST00000352393 NALCNQ8IZF0 1738 aa30.45■■■□□ 2.46
CPNE1-202ENST00000352393 TTC22Q5TAA0 569 aa30.44■■■□□ 2.46
CPNE1-202ENST00000352393 HSP90AA1P07900 732 aaKnown RBP30.44■■■□□ 2.46
CPNE1-202ENST00000352393 SKOR2Q2VWA4 1001 aaPredicted RBP30.44■■■□□ 2.46
CPNE1-202ENST00000352393 ANKRD44Q8N8A2 993 aa30.44■■■□□ 2.46
CPNE1-202ENST00000352393 PRR36Q9H6K5 1346 aa30.43■■■□□ 2.46
CPNE1-202ENST00000352393 GAS2L2Q8NHY3 880 aa30.43■■■□□ 2.46
CPNE1-202ENST00000352393 KIAA0232Q92628 1395 aa30.42■■■□□ 2.46
CPNE1-202ENST00000352393 AEBP1Q8IUX7 1158 aa30.41■■■□□ 2.46
CPNE1-202ENST00000352393 PEAK1Q9H792 1746 aa30.41■■■□□ 2.46
CPNE1-202ENST00000352393 HAP1P54257 671 aaPredicted RBP30.41■■■□□ 2.46
CPNE1-202ENST00000352393 EIF4A2Q14240 407 aaKnown RBP30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms