RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 IL13P35225 146 aa27.77■■■□□ 2.04
NKX2-4-201ENST00000351817 TBC1D2Q9BYX2 928 aa27.77■■■□□ 2.04
NKX2-4-201ENST00000351817 EMILIN1Q9Y6C2 1016 aa27.76■■■□□ 2.04
NKX2-4-201ENST00000351817 PLEKHG1Q9ULL1 1385 aa27.76■■■□□ 2.03
NKX2-4-201ENST00000351817 SLKQ9H2G2 1235 aaPredicted RBP27.76■■■□□ 2.03
NKX2-4-201ENST00000351817 ANTXR1Q9H6X2 564 aa27.76■■■□□ 2.03
NKX2-4-201ENST00000351817 GNAI1P63096 354 aa27.75■■■□□ 2.03
NKX2-4-201ENST00000351817 IFT57Q9NWB7 429 aa27.75■■■□□ 2.03
NKX2-4-201ENST00000351817 MON2Q7Z3U7 1717 aa27.75■■■□□ 2.03
NKX2-4-201ENST00000351817 NME9Q86XW9 330 aa27.75■■■□□ 2.03
NKX2-4-201ENST00000351817 CHMP4BQ9H444 224 aaKnown RBP27.75■■■□□ 2.03
NKX2-4-201ENST00000351817 ARHGAP45Q92619 1136 aa27.74■■■□□ 2.03
NKX2-4-201ENST00000351817 VAMP4O75379 141 aa27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 C22orf23Q9BZE7 217 aa27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 NUCB1Q02818 461 aa27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 IL27Q8NEV9 243 aa27.73■■■□□ 2.03
NKX2-4-201ENST00000351817 MRPL50Q8N5N7 158 aaKnown RBP27.72■■■□□ 2.03
NKX2-4-201ENST00000351817 NUDT16Q96DE0 195 aaKnown RBP27.72■■■□□ 2.03
NKX2-4-201ENST00000351817 PTCH1Q13635 1447 aa27.72■■■□□ 2.03
NKX2-4-201ENST00000351817 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
NKX2-4-201ENST00000351817 ZNF853P0CG23 659 aa27.71■■■□□ 2.03
NKX2-4-201ENST00000351817 MFAP1P55081 439 aaKnown RBP27.71■■■□□ 2.03
NKX2-4-201ENST00000351817 COG3Q96JB2 828 aa27.71■■■□□ 2.03
NKX2-4-201ENST00000351817 LMOD3Q0VAK6 560 aa27.7■■■□□ 2.02
NKX2-4-201ENST00000351817 THUMPD2Q9BTF0 503 aaKnown RBP27.7■■■□□ 2.02
NKX2-4-201ENST00000351817 CCDC61Q9Y6R9 512 aa27.7■■■□□ 2.02
NKX2-4-201ENST00000351817 AKAP12Q02952 1782 aa27.7■■■□□ 2.02
NKX2-4-201ENST00000351817 SLIT1O75093 1534 aa27.69■■■□□ 2.02
NKX2-4-201ENST00000351817 DLG5Q8TDM6 1919 aa27.69■■■□□ 2.02
NKX2-4-201ENST00000351817 ARHGAP23Q9P227 1491 aa27.69■■■□□ 2.02
NKX2-4-201ENST00000351817 ZRANB1Q9UGI0 708 aa27.68■■■□□ 2.02
NKX2-4-201ENST00000351817 ITSN1Q15811 1721 aa27.68■■■□□ 2.02
NKX2-4-201ENST00000351817 NCKAP5LQ9HCH0 1330 aa27.68■■■□□ 2.02
NKX2-4-201ENST00000351817 ZBTB7BO15156 539 aaPredicted RBP27.67■■■□□ 2.02
NKX2-4-201ENST00000351817 PLPPR3Q6T4P5 718 aa27.67■■■□□ 2.02
NKX2-4-201ENST00000351817 MBIPQ9NS73 344 aa27.67■■■□□ 2.02
NKX2-4-201ENST00000351817 CHD1LQ86WJ1 897 aa27.67■■■□□ 2.02
NKX2-4-201ENST00000351817 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.67■■■□□ 2.02
NKX2-4-201ENST00000351817 TSPYL6Q8N831 410 aa27.66■■■□□ 2.02
NKX2-4-201ENST00000351817 PTPRUQ92729 1446 aa27.65■■■□□ 2.02
NKX2-4-201ENST00000351817 CFAP44Q96MT7 982 aa27.65■■■□□ 2.02
NKX2-4-201ENST00000351817 GCC1Q96CN9 775 aa27.64■■■□□ 2.02
NKX2-4-201ENST00000351817 ZNF692Q9BU19 519 aaPredicted RBP27.64■■■□□ 2.02
NKX2-4-201ENST00000351817 LNPKQ9C0E8 428 aa27.64■■■□□ 2.02
NKX2-4-201ENST00000351817 PRR36Q9H6K5 1346 aa27.64■■■□□ 2.02
NKX2-4-201ENST00000351817 SLC26A8Q96RN1 970 aa27.64■■■□□ 2.01
NKX2-4-201ENST00000351817 EID1Q9Y6B2 187 aa27.64■■■□□ 2.01
NKX2-4-201ENST00000351817 TWISTNBQ3B726 338 aaPredicted RBP27.63■■■□□ 2.01
NKX2-4-201ENST00000351817 ABCC4O15439 1325 aa27.63■■■□□ 2.01
NKX2-4-201ENST00000351817 RRS1Q15050 365 aaKnown RBP27.62■■■□□ 2.01
NKX2-4-201ENST00000351817 BRPF3Q9ULD4 1205 aa27.61■■■□□ 2.01
NKX2-4-201ENST00000351817 NRKQ7Z2Y5 1582 aa27.59■■■□□ 2.01
NKX2-4-201ENST00000351817 ELL2O00472 640 aaPredicted RBP27.59■■■□□ 2.01
NKX2-4-201ENST00000351817 BMP2KLQ5H9B9 411 aa27.59■■■□□ 2.01
NKX2-4-201ENST00000351817 API5Q9BZZ5 524 aaKnown RBP27.59■■■□□ 2.01
NKX2-4-201ENST00000351817 RBM25P49756 843 aaKnown RBP27.57■■■□□ 2
NKX2-4-201ENST00000351817 ANKRD45Q5TZF3 282 aa27.57■■■□□ 2
NKX2-4-201ENST00000351817 C8orf58Q8NAV2 365 aa27.57■■■□□ 2
NKX2-4-201ENST00000351817 THEMISQ8N1K5 641 aaPredicted RBP27.56■■■□□ 2
NKX2-4-201ENST00000351817 TOPAZ1Q8N9V7 1692 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 HSCBQ8IWL3 235 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 C1orf115Q9H7X2 142 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 CHMP5Q9NZZ3 219 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 TBX22Q9Y458 520 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 KIF24Q5T7B8 1368 aa27.55■■■□□ 2
NKX2-4-201ENST00000351817 FAM83GA6ND36 823 aa27.53■■■□□ 2
NKX2-4-201ENST00000351817 SPRYD3Q8NCJ5 442 aa27.53■■■□□ 2
NKX2-4-201ENST00000351817 AMOTL2Q9Y2J4 779 aa27.53■■■□□ 2
NKX2-4-201ENST00000351817 SIRT2Q8IXJ6 389 aa27.52■■■□□ 2
NKX2-4-201ENST00000351817 SNX21Q969T3 373 aa27.51■■□□□ 1.99
NKX2-4-201ENST00000351817 DIP2AQ14689 1571 aa27.5■■□□□ 1.99
NKX2-4-201ENST00000351817 RTN4Q9NQC3 1192 aaKnown RBP27.5■■□□□ 1.99
NKX2-4-201ENST00000351817 TTC21BQ7Z4L5 1316 aa27.5■■□□□ 1.99
NKX2-4-201ENST00000351817 HAP1P54257 671 aaPredicted RBP27.49■■□□□ 1.99
NKX2-4-201ENST00000351817 DCTN1Q14203 1278 aa27.49■■□□□ 1.99
NKX2-4-201ENST00000351817 EIF4A2Q14240 407 aaKnown RBP27.49■■□□□ 1.99
NKX2-4-201ENST00000351817 NUTM2FA1L443 756 aa27.48■■□□□ 1.99
NKX2-4-201ENST00000351817 MCM4P33991 863 aa27.48■■□□□ 1.99
NKX2-4-201ENST00000351817 OVOS2A0A0J9YW53 1432 aa27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 PLEKHG3A1L390 1219 aa27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 OVOS2Q6IE36 1432 aa27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 SULT6B1Q6IMI4 303 aa27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 CEP170BQ9Y4F5 1589 aaPredicted RBP27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 NCOA3Q9Y6Q9 1424 aa27.47■■□□□ 1.99
NKX2-4-201ENST00000351817 ACEP12821 1306 aa27.46■■□□□ 1.99
NKX2-4-201ENST00000351817 AEBP1Q8IUX7 1158 aa27.46■■□□□ 1.99
NKX2-4-201ENST00000351817 NALCNQ8IZF0 1738 aa27.45■■□□□ 1.98
NKX2-4-201ENST00000351817 XRN1Q8IZH2 1706 aaKnown RBP27.45■■□□□ 1.98
NKX2-4-201ENST00000351817 PRKCSHP14314 528 aaPredicted RBP27.44■■□□□ 1.98
NKX2-4-201ENST00000351817 INTS3Q68E01 1043 aaKnown RBP27.44■■□□□ 1.98
NKX2-4-201ENST00000351817 CHL1O00533 1208 aa27.43■■□□□ 1.98
NKX2-4-201ENST00000351817 L1TD1Q5T7N2 865 aaKnown RBP27.43■■□□□ 1.98
NKX2-4-201ENST00000351817 USP6P35125 1406 aa27.43■■□□□ 1.98
NKX2-4-201ENST00000351817 KIAA0232Q92628 1395 aa27.42■■□□□ 1.98
NKX2-4-201ENST00000351817 RGPD1P0DJD0 1748 aa27.42■■□□□ 1.98
NKX2-4-201ENST00000351817 TBC1D9Q6ZT07 1266 aa27.41■■□□□ 1.98
NKX2-4-201ENST00000351817 PEAK1Q9H792 1746 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms