RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
TRAF3-202ENST00000351691 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
TRAF3-202ENST00000351691 KIF2CQ99661 725 aa18.53■□□□□ 0.56
TRAF3-202ENST00000351691 NUCB1Q02818 461 aa18.53■□□□□ 0.56
TRAF3-202ENST00000351691 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
TRAF3-202ENST00000351691 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
TRAF3-202ENST00000351691 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
TRAF3-202ENST00000351691 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
TRAF3-202ENST00000351691 U2AF1L5P0DN76 240 aaPredicted RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 U2AF1Q01081 240 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
TRAF3-202ENST00000351691 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
TRAF3-202ENST00000351691 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
TRAF3-202ENST00000351691 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 DDX49Q9Y6V7 483 aaKnown RBP18.51■□□□□ 0.55
TRAF3-202ENST00000351691 IL16Q14005 1332 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 UQCRHLA0A096LP55 91 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 UQCRHP07919 91 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 STK26Q9P289 416 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 ZKSCAN5Q9Y2L8 839 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
TRAF3-202ENST00000351691 SSFA2P28290 1259 aa18.48■□□□□ 0.55
TRAF3-202ENST00000351691 UTP14CQ5TAP6 766 aaKnown RBP18.48■□□□□ 0.55
TRAF3-202ENST00000351691 HDGFL2Q7Z4V5 671 aaPredicted RBP18.48■□□□□ 0.55
TRAF3-202ENST00000351691 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.48■□□□□ 0.55
TRAF3-202ENST00000351691 PRAM1Q96QH2 718 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 ZBTB40Q9NUA8 1239 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 TRIM27P14373 513 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 NUCB2P80303 420 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 SASS6Q6UVJ0 657 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 KIF20BQ96Q89 1820 aa18.47■□□□□ 0.55
TRAF3-202ENST00000351691 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
TRAF3-202ENST00000351691 FYB1O15117 783 aa18.46■□□□□ 0.55
TRAF3-202ENST00000351691 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRAF3-202ENST00000351691 ZSCAN23Q3MJ62 389 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 CCDC39Q9UFE4 941 aa18.45■□□□□ 0.54
TRAF3-202ENST00000351691 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
TRAF3-202ENST00000351691 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
TRAF3-202ENST00000351691 ITPRIPQ8IWB1 547 aa18.44■□□□□ 0.54
TRAF3-202ENST00000351691 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
TRAF3-202ENST00000351691 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
TRAF3-202ENST00000351691 SMC4Q9NTJ3 1288 aa18.44■□□□□ 0.54
TRAF3-202ENST00000351691 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
TRAF3-202ENST00000351691 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
TRAF3-202ENST00000351691 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
TRAF3-202ENST00000351691 ATP7BP35670 1465 aa18.43■□□□□ 0.54
TRAF3-202ENST00000351691 CD2BP2O95400 341 aaKnown RBP18.43■□□□□ 0.54
TRAF3-202ENST00000351691 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
TRAF3-202ENST00000351691 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
TRAF3-202ENST00000351691 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
TRAF3-202ENST00000351691 ESF1Q9H501 851 aaKnown RBP18.42■□□□□ 0.54
TRAF3-202ENST00000351691 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
TRAF3-202ENST00000351691 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
TRAF3-202ENST00000351691 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
TRAF3-202ENST00000351691 CCDC94Q9BW85 323 aaPredicted RBP18.41■□□□□ 0.54
TRAF3-202ENST00000351691 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
TRAF3-202ENST00000351691 DIAPH1O60610 1272 aaKnown RBP18.41■□□□□ 0.54
TRAF3-202ENST00000351691 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
TRAF3-202ENST00000351691 CWC22Q9HCG8 908 aaKnown RBP18.41■□□□□ 0.54
TRAF3-202ENST00000351691 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
TRAF3-202ENST00000351691 C3P01024 1663 aa18.4■□□□□ 0.54
TRAF3-202ENST00000351691 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
TRAF3-202ENST00000351691 RABEP1Q15276 862 aa18.4■□□□□ 0.54
TRAF3-202ENST00000351691 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
TRAF3-202ENST00000351691 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
TRAF3-202ENST00000351691 DMTNQ08495 405 aa18.39■□□□□ 0.54
TRAF3-202ENST00000351691 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.54
TRAF3-202ENST00000351691 CAVIN1Q6NZI2 390 aaKnown RBP18.39■□□□□ 0.53
TRAF3-202ENST00000351691 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
TRAF3-202ENST00000351691 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
TRAF3-202ENST00000351691 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
TRAF3-202ENST00000351691 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
TRAF3-202ENST00000351691 LNPKQ9C0E8 428 aa18.38■□□□□ 0.53
TRAF3-202ENST00000351691 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
TRAF3-202ENST00000351691 FCHSD2O94868 740 aa18.37■□□□□ 0.53
TRAF3-202ENST00000351691 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
TRAF3-202ENST00000351691 ALDH1L2Q3SY69 923 aa18.37■□□□□ 0.53
TRAF3-202ENST00000351691 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
TRAF3-202ENST00000351691 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
TRAF3-202ENST00000351691 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-202ENST00000351691 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
TRAF3-202ENST00000351691 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
TRAF3-202ENST00000351691 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
TRAF3-202ENST00000351691 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRAF3-202ENST00000351691 CDC45O75419 566 aa18.35■□□□□ 0.53
TRAF3-202ENST00000351691 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
TRAF3-202ENST00000351691 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
TRAF3-202ENST00000351691 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
TRAF3-202ENST00000351691 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 757.9 ms